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  1. Fusarium oxysporum infection leads to Fusarium-derived wilt, which is responsible for the greatest losses in flax (Linum usitatissimum) crop yield. Plants infected by Fusarium oxysporu...

    Authors: Wioleta Wojtasik, Anna Kulma, Lucyna Dymińska, Jerzy Hanuza, Magdalena Czemplik and Jan Szopa
    Citation: BMC Plant Biology 2016 16:75
  2. As for many crops, new high-quality grapevine varieties requiring less pesticide and adapted to climate change are needed. In perennial species, breeding is a long process which can be speeded up by gaining kn...

    Authors: Stéphane D. Nicolas, Jean-Pierre Péros, Thierry Lacombe, Amandine Launay, Marie-Christine Le Paslier, Aurélie Bérard, Brigitte Mangin, Sophie Valière, Frédéric Martins, Loïc Le Cunff, Valérie Laucou, Roberto Bacilieri, Alexis Dereeper, Philippe Chatelet, Patrice This and Agnès Doligez
    Citation: BMC Plant Biology 2016 16:74
  3. Maize grain yield depends mainly on the photosynthetic efficiency of functional leaves, which is controlled by an array of gene networks and other factors, including environmental conditions. MicroRNAs (miRNAs...

    Authors: Xiangyuan Wu, Dong Ding, Chaonan Shi, Yadong Xue, Zhanhui Zhang, Guiliang Tang and Jihua Tang
    Citation: BMC Plant Biology 2016 16:73
  4. Abscisic acid (ABA) regulates various developmental processes and stress responses over both short (i.e. hours or days) and longer (i.e. months or seasons) time frames. To elucidate the transcriptional regulat...

    Authors: Supakan Rattanakon, Ryan Ghan, Gregory A. Gambetta, Laurent G. Deluc, Karen A. Schlauch and Grant R. Cramer
    Citation: BMC Plant Biology 2016 16:72
  5. Yield of rapeseed is determined by three components: silique number, seed number per silique and thousand seed weight. Seed number per silique and thousand seed weight are influenced by silique length, seed de...

    Authors: Xiaodong Wang, Li Chen, Aina Wang, Hao Wang, Jianhua Tian, Xiaoping Zhao, Hongbo Chao, Yajun Zhao, Weiguo Zhao, Jun Xiang, Jianping Gan and Maoteng Li
    Citation: BMC Plant Biology 2016 16:71
  6. Increased atmospheric carbon dioxide (CO2) levels predicted to occur before the end of the century will impact plant metabolism. In addition, nitrate availability will affect metabolism and levels of nitrogen-con...

    Authors: Jamuna Risal Paudel, Alexandre Amirizian, Sebastian Krosse, Jessica Giddings, Shoieb Akaram Arief Ismail, Jianguo Xia, James B. Gloer, Nicole M. van Dam and Jacqueline C. Bede
    Citation: BMC Plant Biology 2016 16:68
  7. Secondary metabolism contributes to the adaptation of a plant to its environment. In wine grapes, fruit secondary metabolism largely determines wine quality. Climate change is predicted to exacerbate drought e...

    Authors: Stefania Savoi, Darren C. J. Wong, Panagiotis Arapitsas, Mara Miculan, Barbara Bucchetti, Enrico Peterlunger, Aaron Fait, Fulvio Mattivi and Simone D. Castellarin
    Citation: BMC Plant Biology 2016 16:67
  8. Adventitious roots (AR) develop from tissues other than the primary root, in a process physiologically regulated by phytohormones. Adventitious roots provide structural support and contribute to water and nutr...

    Authors: Cintia L. Ribeiro, Cynthia M. Silva, Derek R. Drost, Evandro Novaes, Carolina R. D. B. Novaes, Christopher Dervinis and Matias Kirst
    Citation: BMC Plant Biology 2016 16:66
  9. Improvement of freezing tolerance of red clover (Trifolium pratense L.) would increase its persistence under cold climate. In this study, we assessed the freezing tolerance and compared the proteome composition o...

    Authors: Annick Bertrand, Marie Bipfubusa, Yves Castonguay, Solen Rocher, Aleksandra Szopinska-Morawska, Yousef Papadopoulos and Jenny Renaut
    Citation: BMC Plant Biology 2016 16:65
  10. Despite recent sequencing efforts, local genetic resources remain underexploited, even though they carry alleles that can bring agronomic benefits. Taking advantage of the recent genotyping with 22,000 single-...

    Authors: Nhung Thi Phuong Phung, Chung Duc Mai, Giang Thi Hoang, Hue Thi Minh Truong, Jeremy Lavarenne, Mathieu Gonin, Khanh Le Nguyen, Thuy Thi Ha, Vinh Nang Do, Pascal Gantet and Brigitte Courtois
    Citation: BMC Plant Biology 2016 16:64
  11. Albumin 1b peptides (A1b) are small disulfide-knotted insecticidal peptides produced by Fabaceae (also called Leguminosae). To date, their diversity among this plant family has been essentially investigated th...

    Authors: L. Karaki, P. Da Silva, F. Rizk, C. Chouabe, N. Chantret, V. Eyraud, F. Gressent, C. Sivignon, I. Rahioui, D. Kahn, C. Brochier-Armanet, Y. Rahbé and C. Royer
    Citation: BMC Plant Biology 2016 16:63
  12. The ARABIDOPSIS SKP1-LIKE1 (ASK1) protein functions as a subunit of SKP1-CUL1-F-box (SCF) E3 ubiquitin ligases. Previous genetic studies showed that ASK1 plays important roles in Arabidopsis flower development...

    Authors: Dihong Lu, Weimin Ni, Bruce A. Stanley and Hong Ma
    Citation: BMC Plant Biology 2016 16:61
  13. Plant immune responses can be induced by endogenous and exogenous signaling molecules. Recently, amino acids and their metabolites have been reported to affect the plant immune system. However, how amino acids...

    Authors: Naoki Kadotani, Aya Akagi, Hiroshi Takatsuji, Tetsuya Miwa and Daisuke Igarashi
    Citation: BMC Plant Biology 2016 16:60
  14. Brachypodium distachyon is a promising model plants for grasses. Infections of Brachypodium by various pathogens that severely impair crop production have been reported, and the specie...

    Authors: Yusuke Kouzai, Mamiko Kimura, Yurie Yamanaka, Megumi Watanabe, Hidenori Matsui, Mikihiro Yamamoto, Yuki Ichinose, Kazuhiro Toyoda, Yoshihiko Onda, Keiichi Mochida and Yoshiteru Noutoshi
    Citation: BMC Plant Biology 2016 16:59
  15. Leucine-rich repeat receptor-like kinases (LRR-RLKs) constitute the largest subfamily of receptor-like kinases in plant. A number of reports have demonstrated that plant LRR-RLKs play important roles in growth, d...

    Authors: Fulai Zhou, Yong Guo and Li-Juan Qiu
    Citation: BMC Plant Biology 2016 16:58
  16. Fontainea picrosperma, a subcanopy tree endemic to the rainforests of northeastern Australia, is of medicinal significance following the discovery of the novel anti-cancer natural prod...

    Authors: R. W. Lamont, G. C. Conroy, P. Reddell and S. M. Ogbourne
    Citation: BMC Plant Biology 2016 16:57
  17. TIR1-like proteins are F-box auxin receptors. Auxin binding to the F-box receptor proteins promotes the formation of SCFTIR1 ubiquitin ligase complex that targets the auxin repressors, Aux/IAAs, for degradation v...

    Authors: I. El-Sharkawy, S. Sherif, W. El Kayal, B. Jones, Z. Li, A. J. Sullivan and Subramanian Jayasankar
    Citation: BMC Plant Biology 2016 16:56
  18. The transition from vegetative to floral state in shoot apical meristems (SAM) is a key event in plant development and is of crucial importance for reproductive success. In perennial plants, this event is recu...

    Authors: B. Guitton, J. J. Kelner, J. M. Celton, X. Sabau, J. P. Renou, D. Chagné and E. Costes
    Citation: BMC Plant Biology 2016 16:55
  19. Aflatoxin contamination caused by Aspergillus flavus in peanut (Arachis hypogaea) including in pre- and post-harvest stages seriously affects industry development and human health. Even though resistance to aflat...

    Authors: Houmiao Wang, Yong Lei, Liyun Wan, Liying Yan, Jianwei Lv, Xiaofeng Dai, Xiaoping Ren, Wei Guo, Huifang Jiang and Boshou Liao
    Citation: BMC Plant Biology 2016 16:54
  20. Fusarium oxysporum f.sp. radicis-lycopersici (FORL) is one of the most destructive necrotrophic pathogens affecting tomato crops, causing considerable field and greenhouse yield losses...

    Authors: Daniele Manzo, Francesca Ferriello, Gerardo Puopolo, Astolfo Zoina, Daniela D’Esposito, Luca Tardella, Alberto Ferrarini and Maria Raffaella Ercolano
    Citation: BMC Plant Biology 2016 16:53
  21. Tomato leaf mold is a common disease in tomato cultivation. This disease is caused by Cladosporium fulvum, which has many physiological races and differentiates rapidly. Cf genes confer resistance to C. fulvum, a...

    Authors: Tingting Zhao, Jingbin Jiang, Guan Liu, Shanshan He, He Zhang, Xiuling Chen, Jingfu Li and Xiangyang Xu
    Citation: BMC Plant Biology 2016 16:51
  22. Doubled haploid (DH) lines produced via in vivo haploid induction have become indispensable in maize research and practical breeding, so it is important to understand traits characteristics in DH and its corre...

    Authors: Yujie Meng, Junhui Li, Jianju Liu, Haixiao Hu, Wei Li, Wenxin Liu and Shaojiang Chen
    Citation: BMC Plant Biology 2016 16:50
  23. Depiction of the genetic diversity, linkage disequilibrium (LD) and population structure is essential for the efficient organization and exploitation of genetic resources. The objectives of this study were to ...

    Authors: José Antonio Campoy, Emilie Lerigoleur-Balsemin, Hélène Christmann, Rémi Beauvieux, Nabil Girollet, José Quero-García, Elisabeth Dirlewanger and Teresa Barreneche
    Citation: BMC Plant Biology 2016 16:49
  24. Mitogen-activated protein kinase (MPK) cascades are important to cellular signaling in eukaryotes. They regulate growth, development and the response to environmental challenges. MPK cascades function via reve...

    Authors: Franz Leissing, Mika Nomoto, Marco Bocola, Ulrich Schwaneberg, Yasuomi Tada, Uwe Conrath and Gerold J. M. Beckers
    Citation: BMC Plant Biology 2016 16:48
  25. Leafy spurge (Euphorbia esula L.) is an herbaceous weed that maintains a perennial growth pattern through seasonal production of abundant underground adventitious buds (UABs) on the crown and lateral roots. Durin...

    Authors: Wun S. Chao, Münevver Doğramaci, David P. Horvath, James V. Anderson and Michael E. Foley
    Citation: BMC Plant Biology 2016 16:47
  26. Mungbean (Vigna radiata [L.] R. Wilczek) is an important legume crop with high nutritional value in South and Southeast Asia. The crop plant is susceptible to a storage pest caused by bruchids (Callosobruchus spp...

    Authors: Mao-Sen Liu, Tony Chien-Yen Kuo, Chia-Yun Ko, Dung-Chi Wu, Kuan-Yi Li, Wu-Jui Lin, Ching-Ping Lin, Yen-Wei Wang, Roland Schafleitner, Hsiao-Feng Lo, Chien-Yu Chen and Long-Fang O. Chen
    Citation: BMC Plant Biology 2016 16:46
  27. Heterosis or hybrid vigour is a phenomenon in which hybrid progeny exhibit superior performance compared to their parental inbred lines. Most commercial Chinese cabbage cultivars are F1 hybrids and their level of...

    Authors: Natsumi Saeki, Takahiro Kawanabe, Hua Ying, Motoki Shimizu, Mikiko Kojima, Hiroshi Abe, Keiichi Okazaki, Makoto Kaji, Jennifer M. Taylor, Hitoshi Sakakibara, W. James Peacock, Elizabeth S. Dennis and Ryo Fujimoto
    Citation: BMC Plant Biology 2016 16:45
  28. In melting flesh peaches, auxin is necessary for system-2 ethylene synthesis and a cross-talk between ethylene and auxin occurs during the ripening process. To elucidate this interaction at the transition from...

    Authors: Alice Tadiello, Vanina Ziosi, Alfredo Simone Negri, Massimo Noferini, Giovanni Fiori, Nicola Busatto, Luca Espen, Guglielmo Costa and Livio Trainotti
    Citation: BMC Plant Biology 2016 16:44
  29. Light plays an important role in plant growth and development. In this study, the impact of light on physiology of 20-d-old Arabidopsis leaves was examined through transcriptomic, proteomic and metabolomic ana...

    Authors: Chao Liang, Shifeng Cheng, Youjun Zhang, Yuzhe Sun, Alisdair R. Fernie, Kang Kang, Gianni Panagiotou, Clive Lo and Boon Leong Lim
    Citation: BMC Plant Biology 2016 16:43
  30. Plants perceive UV-B through the UV RESISTANCE LOCUS 8 (UVR8) photoreceptor and UVR8 activation leads to changes in gene expression such as those associated with UV-B acclimation and stress tolerance. Albeit f...

    Authors: Melanie Binkert, Carlos D. Crocco, Babatunde Ekundayo, Kelvin Lau, Sarah Raffelberg, Kimberley Tilbrook, Ruohe Yin, Richard Chappuis, Thomas Schalch and Roman Ulm
    Citation: BMC Plant Biology 2016 16:42
  31. Auxin was recognized as a secondary dormancy phytohormone, controlling seed dormancy and germination. However, the exogenous auxin-controlled seed dormancy and germination remain unclear in physiological proce...

    Authors: Zhenhua Li, Jie Zhang, Yiling Liu, Jiehong Zhao, Junjie Fu, Xueliang Ren, Guoying Wang and Jianhua Wang
    Citation: BMC Plant Biology 2016 16:41
  32. MicroRNAs (miRNAs) are important regulatory elements of gene expression. Similarly to coding genes, miRNA genes follow a birth and death pattern of evolution likely reflecting functional relevance and divergen...

    Authors: Edna Gicela Ortiz Morea, Eder Marques da Silva, Geraldo Felipe Ferreira e Silva, Guilherme Targino Valente, Carlos Hernan Barrera Rojas, Michel Vincentz and Fabio Tebaldi Silveira Nogueira
    Citation: BMC Plant Biology 2016 16:40

    The Erratum to this article has been published in BMC Plant Biology 2016 16:153

  33. Eragrostis tef is an allotetraploid (2n = 4 × = 40) annual, C4 grass with an estimated nuclear genome size of 730 Mbp. It is widely grown in Ethiopia, where it provides basic nutrition...

    Authors: Yohannes Gedamu Gebre, Edoardo Bertolini, Mario Enrico Pè and Andrea Zuccolo
    Citation: BMC Plant Biology 2016 16:39
  34. Abscission is a highly coordinated developmental process by which plants control vegetative and reproductive organs load. Aiming at get new insights on flower abscission regulation, changes in the global trans...

    Authors: Sara Domingos, Joana Fino, Vânia Cardoso, Claudia Sánchez, José C. Ramalho, Roberto Larcher, Octávio S. Paulo, Cristina M. Oliveira and Luis F. Goulao
    Citation: BMC Plant Biology 2016 16:38
  35. Due to the climate change of the past few decades, some agricultural areas in the world are now experiencing new climatic extremes. For soybean, high temperatures and drought stress can potentially lead to the...

    Authors: Renake N. Teixeira, Wilco Ligterink, José de B. França-Neto, Henk W.M. Hilhorst and Edvaldo A. A. da Silva
    Citation: BMC Plant Biology 2016 16:37
  36. Individual fiber strength is an important quality attribute that greatly influences the strength of the yarn spun from cotton fibers. Fiber strength is usually measured from bundles of fibers due to the diffic...

    Authors: Md S. Islam, David D. Fang, Gregory N. Thyssen, Chris D. Delhom, Yongliang Liu and Hee Jin Kim
    Citation: BMC Plant Biology 2016 16:36
  37. Photosynthesis plays a vital role as an energy source for plant metabolism, and its efficiency may be drastically reduced owing to abiotic stresses. Moso bamboo (Phyllostachys edulis), is a renewable and versatil...

    Authors: Hansheng Zhao, Yongfeng Lou, Huayu Sun, Lichao Li, Lili Wang, Lili Dong and Zhimin Gao
    Citation: BMC Plant Biology 2016 16:34
  38. Genetic manipulation of brassinosteroid (BR) biosynthesis or signaling is a promising strategy to improve crop yield and quality. However, the relationships between the BR-promoted growth and photosynthesis an...

    Authors: Xiao-Jing Li, Xie Guo, Yan-Hong Zhou, Kai Shi, Jie Zhou, Jing-Quan Yu and Xiao-Jian Xia
    Citation: BMC Plant Biology 2016 16:33
  39. Plant defense traits require resources and energy that plants may otherwise use for growth and reproduction. In order to most efficiently protect plant tissues from herbivory, one widely accepted assumption of...

    Authors: Adrienne L. Godschalx, Lauren Stady, Benjamin Watzig and Daniel J. Ballhorn
    Citation: BMC Plant Biology 2016 16:32
  40. Calcium, as a second messenger, transduces extracellular signals into cellular reactions. A rise in cytosolic calcium concentration is one of the first plant responses after exposure to microbe-associated mole...

    Authors: Fabian Trempel, Hiroyuki Kajiura, Stefanie Ranf, Julia Grimmer, Lore Westphal, Cyril Zipfel, Dierk Scheel, Kazuhito Fujiyama and Justin Lee
    Citation: BMC Plant Biology 2016 16:31
  41. Barley and bread wheat show large differences in frequencies of Single Nucleotide Polymorphism (SNP) as determined from genome-wide studies. These frequencies have been estimated as 2.4-3 times higher in the e...

    Authors: Yuri Shavrukov
    Citation: BMC Plant Biology 2016 16(Suppl 1):11

    This article is part of a Supplement: Volume 16 Supplement 1

  42. In wheat, the vernalization requirement is mainly controlled by the VRN genes. Different species of hexaploid and tetraploid wheat are widely used as genetic source for new mutant variants and alleles for fundame...

    Authors: Alexandr Muterko, Ruslan Kalendar and Elena Salina
    Citation: BMC Plant Biology 2016 16(Suppl 1):9

    This article is part of a Supplement: Volume 16 Supplement 1

  43. Variability of heading date may assist in wheat adaptation to local environments. Thereafter, discovery of new heading date determinants is important for cereal improvement. In this study we used common wheat ...

    Authors: Antonina A. Kiseleva, Andrey B. Shcherban, Irina N. Leonova, Zeev Frenkel and Elena A. Salina
    Citation: BMC Plant Biology 2016 16(Suppl 1):8

    This article is part of a Supplement: Volume 16 Supplement 1

  44. Radish (Raphanus sativus L.) is a widespread agricultural plant forming storage root due to extensive secondary growth which involves cambium proliferation and differentiation of secondary conductive tissues. Clo...

    Authors: Maria S. Gancheva, Irina E. Dodueva, Maria A. Lebedeva, Varvara E. Tvorogova, Alexandr A. Tkachenko and Ludmila A. Lutova
    Citation: BMC Plant Biology 2016 16(Suppl 1):7

    This article is part of a Supplement: Volume 16 Supplement 1

  45. Stem rust (SR) is one of the most economically devastating barley diseases in Kazakhstan, and in some years it causes up to 50 % of yield losses. Routine conventional breeding for resistance to stem rust is al...

    Authors: Yerlan Turuspekov, Danara Ormanbekova, Aralbek Rsaliev and Saule Abugalieva
    Citation: BMC Plant Biology 2016 16(Suppl 1):6

    This article is part of a Supplement: Volume 16 Supplement 1

  46. Theauxin efflux carrier PIN1 is a key mediator of polar auxin transport in developing plant tissues. This is why factors that are supposed to be involved in auxin distribution are frequently tested in the regu...

    Authors: N.A. Omelyanchuk, V.V. Kovrizhnykh, E.A. Oshchepkova, T. Pasternak, K. Palme and V.V. Mironova
    Citation: BMC Plant Biology 2016 16(Suppl 1):5

    This article is part of a Supplement: Volume 16 Supplement 1

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