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  1. Vegetative buds provide plants in temperate environments the possibility for growth and reproduction when environmental conditions are favorable. In grapevine, crucial developmental events take place within bu...

    Authors: José Díaz-Riquelme, Jérôme Grimplet, José M Martínez-Zapater and María J Carmona
    Citation: BMC Plant Biology 2012 12:181
  2. Plant defensins represent a major innate immune protein superfamily that displays strong inhibitory effects on filamentous fungi. The total number of plant defensins in a conifer species is unknown since there...

    Authors: Pere Picart, Anna Maria Pirttilä, Dora Raventos, Hans-Henrik Kristensen and Hans-Georg Sahl
    Citation: BMC Plant Biology 2012 12:180
  3. Seed germination is of immense significance for agriculture and has been studied for centuries. Yet, our understanding of the molecular mechanisms underlying regulation of dormancy and germination is still in ...

    Authors: Petra Stamm, Pratibha Ravindran, Bijayalaxmi Mohanty, Ee Ling Tan, Hao Yu and Prakash P Kumar
    Citation: BMC Plant Biology 2012 12:179
  4. The pollen grain contains the male gametophyte that extends a pollen tube that grows through female tissues in order to deliver sperm to the embryo sac for double fertilization. Growing pollen tubes form perio...

    Authors: Peng Qin, Dylan Ting, Andrew Shieh and Sheila McCormick
    Citation: BMC Plant Biology 2012 12:178
  5. Small non-coding RNAs (smRNAs) are known to have major roles in gene regulation in eukaryotes. In plants, knowledge of the biogenesis and mechanisms of action of smRNA classes including microRNAs (miRNAs), sho...

    Authors: Gracia Zabala, Edhilvia Campos, Kranthi K Varala, Sean Bloomfield, Sarah I Jones, Hlaing Win, Jigyasa H Tuteja, Bernarda Calla, Steven J Clough, Matthew Hudson and Lila O Vodkin
    Citation: BMC Plant Biology 2012 12:177
  6. The YABBY (YAB) family of transcription factors participate in a diverse range of processes that include leaf and floral patterning, organ growth, and the control of shoot apical meristem organisation and acti...

    Authors: Oliver Bonaccorso, Joanne E Lee, Libby Puah, Charles P Scutt and John F Golz
    Citation: BMC Plant Biology 2012 12:176
  7. Thellungiella salsuginea is an important model plant due to its natural tolerance to abiotic stresses including salt, cold, and water deficits. Microarray and metabolite profiling have shown that Thellungiella un...

    Authors: David R Guevara, Marc J Champigny, Ashley Tattersall, Jeff Dedrick, Chui E Wong, Yong Li, Aurelie Labbe, Chien-Lu Ping, Yanxiang Wang, Paulo Nuin, G Brian Golding, Brian E McCarry, Peter S Summers, Barbara A Moffatt and Elizabeth A Weretilnyk
    Citation: BMC Plant Biology 2012 12:175
  8. Grapes are a major fruit crop around the world. Heat stress can significantly reduce grape yield and quality. Changes at the molecular level in response to heat stress and subsequent recovery are poorly unders...

    Authors: Guo-Tian Liu, Jun-Fang Wang, Grant Cramer, Zhan-Wu Dai, Wei Duan, Hong-Guo Xu, Ben-Hong Wu, Pei-Ge Fan, Li-Jun Wang and Shao-Hua Li
    Citation: BMC Plant Biology 2012 12:174
  9. Hybrid poplars species are candidates for biomass production but breeding efforts are needed to combine productivity and water use efficiency in improved cultivars. The understanding of the genetic architectur...

    Authors: Romain Monclus, Jean-Charles Leplé, Catherine Bastien, Pierre-François Bert, Marc Villar, Nicolas Marron, Franck Brignolas and Véronique Jorge
    Citation: BMC Plant Biology 2012 12:173
  10. A plant’s endogenous clock (circadian clock) entrains physiological processes to light/dark and temperature cycles. Forward and reverse genetic approaches in Arabidopsis have revealed the mechanisms of the circad...

    Authors: Felipe Yon, Pil-Joon Seo, Jae Yong Ryu, Chung-Mo Park, Ian T Baldwin and Sang-Gyu Kim
    Citation: BMC Plant Biology 2012 12:172
  11. While the genetic transformation of the major cereal crops has become relatively routine, to date only a few reports were published on transgenic triticale, and robust data on T-DNA integration and segregation...

    Authors: Goetz Hensel, Sylwia Oleszczuk, Diaa Eldin S Daghma, Janusz Zimny, Michael Melzer and Jochen Kumlehn
    Citation: BMC Plant Biology 2012 12:171
  12. Maternal effects may influence a range of seed traits simultaneously and are likely to be context-dependent. Disentangling the interactions of plant phenotype and growth environment on various seed traits is i...

    Authors: Lei Wang, Jerry M Baskin, Carol C Baskin, J Hans C Cornelissen, Ming Dong and Zhenying Huang
    Citation: BMC Plant Biology 2012 12:170
  13. The Arabidopsis microRNA156 (miR156) regulates 11 members of the SQUAMOSA PROMOTER BINDING PROTEIN LIKE (SPL) family by base pairing to complementary target mRNAs. Each SPL gene further regulates a set of other g...

    Authors: Shu Wei, Margaret Y Gruber, Bianyun Yu, Ming-Jun Gao, George G Khachatourians, Dwayne D Hegedus, Isobel AP Parkin and Abdelali Hannoufa
    Citation: BMC Plant Biology 2012 12:169
  14. Black pepper (Piper nigrum L.) is one of the most popular spices in the world. It is used in cooking and the preservation of food and even has medicinal properties. Losses in production from disease are a major l...

    Authors: Sheila MC Gordo, Daniel G Pinheiro, Edith CO Moreira, Simone M Rodrigues, Marli C Poltronieri, Oriel F de Lemos, Israel Tojal da Silva, Rommel TJ Ramos, Artur Silva, Horacio Schneider, Wilson A Silva Jr, Iracilda Sampaio and Sylvain Darnet
    Citation: BMC Plant Biology 2012 12:168
  15. MADS-box genes constitute a large family of transcription factors functioning as key regulators of many processes during plant vegetative and reproductive development. Type II MADS-box genes have been intensively...

    Authors: Aliki Kapazoglou, Cawas Engineer, Vicky Drosou, Chrysanthi Kalloniati, Eleni Tani, Aphrodite Tsaballa, Evangelia D Kouri, Ioannis Ganopoulos, Emmanouil Flemetakis and Athanasios S Tsaftaris
    Citation: BMC Plant Biology 2012 12:166
  16. The intrinsically unstructured state of some proteins, observed in all living organisms, is essential for basic cellular functions. In this field the available information from plants is limited but it has bee...

    Authors: Inmaculada Yruela and Bruno Contreras-Moreira
    Citation: BMC Plant Biology 2012 12:165
  17. In yeast and mammals, many plasma membrane (PM) proteins destined for degradation are tagged with ubiquitin. These ubiquitinated proteins are internalized into clathrin-coated vesicles and are transported to e...

    Authors: David Scheuring, Fabian Künzl, Corrado Viotti, Melody SanWan Yan, Liwen Jiang, Swen Schellmann, David G Robinson and Peter Pimpl
    Citation: BMC Plant Biology 2012 12:164
  18. Amaranthus cruentus and A. hypochondriacus are crop plants grown for grain production in subtropical countries. Recently, the generation of large-scale transcriptomic data opened the possibility to study represen...

    Authors: Paula Andrea Castrillón-Arbeláez, Norma Martínez-Gallardo, Hamlet Avilés Arnaut, Axel Tiessen and John Paul Délano-Frier
    Citation: BMC Plant Biology 2012 12:163
  19. Olive (Olea europaea L.) fruits contain numerous secondary metabolites, primarily phenolics, terpenes and sterols, some of which are particularly interesting for their nutraceutical properties. This study will at...

    Authors: Fiammetta Alagna, Roberto Mariotti, Francesco Panara, Silvia Caporali, Stefania Urbani, Gianluca Veneziani, Sonia Esposto, Agnese Taticchi, Adolfo Rosati, Rosa Rao, Gaetano Perrotta, Maurizio Servili and Luciana Baldoni
    Citation: BMC Plant Biology 2012 12:162
  20. Plant cytosolic ribosomal proteins are encoded by small gene families. Mutants affecting these genes are often viable, but show growth and developmental defects, suggesting incomplete functional redundancy wit...

    Authors: Petra Stirnberg, Jin-Ping Liu, Sally Ward, Sarah L Kendall and Ottoline Leyser
    Citation: BMC Plant Biology 2012 12:160
  21. The Biopeptide BP100 is a synthetic and strongly cationic α-helical undecapeptide with high, specific antibacterial activity against economically important plant-pathogenic bacteria, and very low toxicity. It ...

    Authors: Anna Nadal, Maria Montero, Nuri Company, Esther Badosa, Joaquima Messeguer, Laura Montesinos, Emilio Montesinos and Maria Pla
    Citation: BMC Plant Biology 2012 12:159
  22. Silene latifolia and its pollinator, the noctuid moth Hadena bicruris, represent an open nursery pollination system wherein floral volatiles, especially veratrole (1, 2-dimethoxybenzene), lilac aldehydes, and phe...

    Authors: Alok K Gupta, Tariq A Akhtar, Alex Widmer, Eran Pichersky and Florian P Schiestl
    Citation: BMC Plant Biology 2012 12:158
  23. Pelargonium is one of the most popular garden plants in the world. Moreover, it has a considerable economic importance in the ornamental plant market. Conventional cross-breeding strategies have generated a ra...

    Authors: Begoña García-Sogo, Benito Pineda, Edelín Roque, Teresa Antón, Alejandro Atarés, Marisé Borja, José Pío Beltrán, Vicente Moreno and Luis Antonio Cañas
    Citation: BMC Plant Biology 2012 12:156
  24. Polyploidization is considered one of the main mechanisms of plant genome evolution. The presence of multiple copies of the same gene reduces selection pressure and permits sub-functionalization and neo-functi...

    Authors: Jan Bartoš, Čestmír Vlček, Frédéric Choulet, Mária Džunková, Kateřina Cviková, Jan Šafář, Hana Šimková, Jan Pačes, Hynek Strnad, Pierre Sourdille, Hélène Bergès, Federica Cattonaro, Catherine Feuillet and Jaroslav Doležel
    Citation: BMC Plant Biology 2012 12:155
  25. The majority of nitrogen accumulating in cereal grains originates from proteins remobilised from vegetative organs. However, interactions between grain filling and remobilisation are poorly understood. We used...

    Authors: Stefan Kohl, Julien Hollmann, Frank R Blattner, Volodymyr Radchuk, Franka Andersch, Burkhard Steuernagel, Thomas Schmutzer, Uwe Scholz, Karin Krupinska, Hans Weber and Winfriede Weschke
    Citation: BMC Plant Biology 2012 12:154
  26. Genetic markers and linkage mapping are basic prerequisites for comparative genetic analyses, QTL detection and map-based cloning. A large number of mapping populations have been developed for oak, but few gen...

    Authors: Catherine Bodénès, Emilie Chancerel, Oliver Gailing, Giovanni G Vendramin, Francesca Bagnoli, Jerome Durand, Pablo G Goicoechea, Carolina Soliani, Fiorella Villani, Claudia Mattioni, Hans Peter Koelewijn, Florent Murat, Jerome Salse, Guy Roussel, Christophe Boury, Florian Alberto…
    Citation: BMC Plant Biology 2012 12:153
  27. Furanocoumarins are molecules with proven therapeutic properties and are produced in only a small number of medicinal plant species such as Ruta graveolens. In vivo, these molecules play a protective role against...

    Authors: Fazeelat Karamat, Alexandre Olry, Sébastien Doerper, Guilhem Vialart, Pascaline Ullmann, Danièle Werck-Reichhart, Frédéric Bourgaud and Alain Hehn
    Citation: BMC Plant Biology 2012 12:152
  28. Flowering time is an important trait in Brassica rapa crops. FLOWERING LOCUS C (FLC) is a MADS-box transcription factor that acts as a potent repressor of flowering. Expression of FLC is silenced when plants are ...

    Authors: Jian Wu, Keyun Wei, Feng Cheng, Shikai Li, Qian Wang, Jianjun Zhao, Guusje Bonnema and Xiaowu Wang
    Citation: BMC Plant Biology 2012 12:151
  29. Cell separation that occurs during fleshy fruit abscission and dry fruit dehiscence facilitates seed dispersal, the final stage of plant reproductive development. While our understanding of the evolutionary co...

    Authors: Peerapat Roongsattham, Fabienne Morcillo, Chatchawan Jantasuriyarat, Maxime Pizot, Steven Moussu, Dasuni Jayaweera, Myriam Collin, Zinnia H Gonzalez-Carranza, Philippe Amblard, James W Tregear, Somvong Tragoonrung, Jean-Luc Verdeil and Timothy J Tranbarger
    Citation: BMC Plant Biology 2012 12:150
  30. MicroRNAs (miRNAs) have recently emerged as important gene regulators in plants. MiRNAs and their targets have been extensively studied in Arabidopsis and rice. However, relatively little is known about the chara...

    Authors: Hong Zhu, Rui Xia, Bingyu Zhao, Yong-qiang An, Chris D Dardick, Ann M Callahan and Zongrang Liu
    Citation: BMC Plant Biology 2012 12:149
  31. Genetic mapping and QTL detection are powerful methodologies in plant improvement and breeding. Construction of a high-density and high-quality genetic map would be of great benefit in the production of superi...

    Authors: Nian Wang, Linchuan Fang, Haiping Xin, Lijun Wang and Shaohua Li
    Citation: BMC Plant Biology 2012 12:148
  32. The analyses of protein synthesis, accumulation and regulation during grain development in wheat are more complex because of its larger genome size compared to model plants such as Arabidopsis and rice. In thi...

    Authors: Guangfang Guo, Dongwen Lv, Xing Yan, Saminathan Subburaj, Pei Ge, Xiaohui Li, Yingkao Hu and Yueming Yan
    Citation: BMC Plant Biology 2012 12:147
  33. Small non-coding RNAs (sRNAs) play key roles in plant development, growth and responses to biotic and abiotic stresses. At least four classes of sRNAs have been well characterized in plants, including repeat-a...

    Authors: Li-Chuan Wan, Feng Wang, Xiangqian Guo, Shanfa Lu, Zongbo Qiu, Yuanyuan Zhao, Haiyan Zhang and Jinxing Lin
    Citation: BMC Plant Biology 2012 12:146
  34. Histone acetyltransferases (HATs) play an important role in eukaryotic transcription. Eight HATs identified in rice (OsHATs) can be organized into four families, namely the CBP (OsHAC701, OsHAC703, and OsHAC70...

    Authors: Xia Liu, Ming Luo, Wei Zhang, Jinhui Zhao, Jianxia Zhang, Keqiang Wu, Lining Tian and Jun Duan
    Citation: BMC Plant Biology 2012 12:145
  35. As a large family of regulatory proteins, WRKY transcription factors play essential roles in the processes of adaptation to diverse environmental stresses and plant growth and development. Although several stu...

    Authors: Feifei Yu, Yifeng Huaxia, Wenjing Lu, Changai Wu, Xuecheng Cao and Xingqi Guo
    Citation: BMC Plant Biology 2012 12:144
  36. The establishment of compatibility between plants and pathogens requires compliance with various conditions, such as recognition of the right host, suppression of defence mechanisms, and maintenance of an envi...

    Authors: Georgina Fabro and María Elena Alvarez
    Citation: BMC Plant Biology 2012 12:143
  37. High-accuracy prediction tools are essential in the post-genomic era to define organellar proteomes in their full complexity. We recently applied a discriminative machine learning approach to predict plant pro...

    Authors: Gopal Chowdhary, Amr RA Kataya, Thomas Lingner and Sigrun Reumann
    Citation: BMC Plant Biology 2012 12:142
  38. The Barley stripe mosaic virus (BSMV)-based vector has been developed and used for gene silencing in barley and wheat seedlings to assess gene functions in pathogen- or insect-resistance, but conditions for gene ...

    Authors: Meng Ma, Yan Yan, Li Huang, Mingshun Chen and Huixian Zhao
    Citation: BMC Plant Biology 2012 12:141
  39. Dehydrins (DHNs) protect plant cells from desiccation damage during environmental stress, and also participate in host resistance to various pathogens. In this study, we aimed to identify and characterize the DHN

    Authors: Yazhou Yang, Mingyang He, Ziguo Zhu, Shuxiu Li, Yan Xu, Chaohong Zhang, Stacy D Singer and Yuejin Wang
    Citation: BMC Plant Biology 2012 12:140
  40. R genes are a key component of genetic interactions between plants and biotrophic bacteria and are known to regulate resistance against bacterial invasion. The most common R proteins contain a nucleotide-bindi...

    Authors: Yang Jae Kang, Kil Hyun Kim, Sangrea Shim, Min Young Yoon, Suli Sun, Moon Young Kim, Kyujung Van and Suk-Ha Lee
    Citation: BMC Plant Biology 2012 12:139
  41. Identification of the novel genes relevant to plant cell-wall (PCW) synthesis represents a highly important and challenging problem. Although substantial efforts have been invested into studying this problem, ...

    Authors: Shan Wang, Yanbin Yin, Qin Ma, Xiaojia Tang, Dongyun Hao and Ying Xu
    Citation: BMC Plant Biology 2012 12:138
  42. Rice is staple food for more than half of the world’s population including two billion Asians, who obtain 60-70% of their energy intake from rice and its derivatives. To meet the growing demand from human popu...

    Authors: Balram Marathi, Smriti Guleria, Trilochan Mohapatra, Rajender Parsad, Nagarajan Mariappan, Vinod Kunnummal Kurungara, Salwandir Singh Atwal, Kumble Vinod Prabhu, Nagendra Kumar Singh and Ashok Kumar Singh
    Citation: BMC Plant Biology 2012 12:137
  43. Nuña bean is a type of ancient common bean (Phaseolus vulgaris L.) native to the Andean region of South America, whose seeds possess the unusual property of popping. The nutritional features of popped seeds make ...

    Authors: Fernando J Yuste-Lisbona, Marta Santalla, Carmen Capel, Manuel García-Alcázar, María De La Fuente, Juan Capel, Antonio M De Ron and Rafael Lozano
    Citation: BMC Plant Biology 2012 12:136
  44. Cell division and cell fate decisions regulate organ formation and function in plant growth and development. It is still unclear how specific meristematic regulatory networks operate with the cell cycle machin...

    Authors: Yajie Liu, Wei Ye, Beibei Li, Xiaojing Zhou, Yuhai Cui, Mark P Running and Kede Liu
    Citation: BMC Plant Biology 2012 12:135
  45. Mitogen activated protein kinase (MAPK) cascade is an important signaling cascade that operates in stress signal transduction in plants. The biologically active monoterpenoid indole alkaloids (MIA) produced in Ca...

    Authors: Susheel Kumar Raina, Dhammaprakash Pandhari Wankhede, Monika Jaggi, Pallavi Singh, Siddhi Kashinath Jalmi, Badmi Raghuram, Arsheed Hussain Sheikh and Alok Krishna Sinha
    Citation: BMC Plant Biology 2012 12:134
  46. Plant stilbenes are a small group of phenylpropanoids, which have been detected in at least 72 unrelated plant species and accumulate in response to biotic and abiotic stresses such as infection, wounding, UV-...

    Authors: Alessandro Vannozzi, Ian B Dry, Marianna Fasoli, Sara Zenoni and Margherita Lucchin
    Citation: BMC Plant Biology 2012 12:130

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