Sample | Raw reads | Clean reads | Clean bases (GB) | Q20 (%) | Q30 (%) | GC (%) |
---|---|---|---|---|---|---|
UZ1 | 46,603,148 | 45,146,854 | 6.77 | 98.00 | 94.22 | 56.33 |
UZ2 | 49,420,806 | 47,807,722 | 7.17 | 97.81 | 93.86 | 54.78 |
UZ3 | 42,902,642 | 41,640,002 | 6.25 | 97.53 | 92.90 | 53.82 |
HZ1 | 48,212,238 | 46,410,308 | 6.96 | 97.74 | 93.65 | 56.33 |
HZ2 | 48,498,062 | 46,806,002 | 7.02 | 97.78 | 93.83 | 56.54 |
HZ3 | 48,221,644 | 46,489,082 | 6.97 | 97.97 | 94.27 | 56.16 |
UD1 | 50,124,628 | 48,356,138 | 7.25 | 97.97 | 94.12 | 54.41 |
UD2 | 47,484,336 | 45,806,326 | 6.87 | 97.78 | 93.80 | 54.68 |
UD3 | 58,102,318 | 55,845,286 | 8.38 | 97.84 | 93.96 | 55.31 |
HD1 | 49,217,846 | 48,033,504 | 7.21 | 98.17 | 94.37 | 57.84 |
HD2 | 54,232,698 | 52,466,972 | 7.87 | 97.77 | 93.79 | 55.85 |
HD3 | 54,567,778 | 52,631,730 | 7.89 | 97.96 | 94.18 | 55.60 |
UN1 | 48,761,438 | 46,973,514 | 7.05 | 97.84 | 94.00 | 56.53 |
UN2 | 50,405,442 | 48,520,770 | 7.28 | 97.93 | 94.19 | 57.07 |
UN3 | 49,327,488 | 47,639,518 | 7.15 | 97.82 | 93.87 | 56.43 |
HN1 | 47,287,982 | 45,726,868 | 6.86 | 98.08 | 94.41 | 55.06 |
HN2 | 47,632,352 | 46,103,870 | 6.92 | 97.93 | 94.08 | 54.54 |
HN3 | 49,838,866 | 47,919,512 | 7.19 | 97.72 | 93.65 | 56.67 |