Table 2 Association signals for different rice RHSR with strong LD

qHTT1

Chr1_2646045

OsNTL3

0.31

T/C

C

3.38

-

2.50

qHTT3.1

Chr3_17441838

0.32

T/C

C

1.56

4.20

3.40

qHTT3.2

Chr3_17758466

0.34

T/A

A

3.51

7.45

3.00

qHTT4.1

Chr4_24524161

0.17

G/A

A

3.45

-

2.60

qHTT4.2

Chr4_31476593

0.3

G/C

G

2.65

9.70

2.60

qHTT5

Chr5_6246272

0.08

C/T

C

1.37

-

3.20

qHTT7.1

Chr7_252305

0.14

G/A

A

2.86

-

2.70

qHTT7.2

Chr7_24472878

0.12

C/A

A

2.24

-

3.20

qHTT-XI3.1

Chr3_18061266

0.04

T/C

C

4.75

-

6.40

qHTT-XI3.2

Chr3_20328744

0.05

C/T

T

-

2.08

4.60

qHTT-XI3.3

Chr3_21497502

0.10

T/C

C

-

4.59

4.05

qHTT-XI4.1

Chr4_31453877

0.30

A/G

A

-

5.37

33.60

qHTT-XI 5

Chr5_6820123

0.05

G/A

A

-

5.10

4.10

qHTT-XI12

Chr12_15207279

0.17

G/A

A

-

4.88

3.40