Skip to main content

Table 2 List of candidate genes identified as potentially involved in tuber bruising in previous studies. The References column cites the article in which genes were found related to bruising, as well as the publication in which the gene was identified (if different)

From: Investigating the genetic components of tuber bruising in a breeding population of tetraploid potatoes

Gene annotation

Abbreviation

Gene ID (PGSC0003DMG)

Chromosome

Position (MB)

References

\(\alpha\)-glucan phosphorylase L-type

PHO1A

400007782

ST4.03ch00

38.54

[5, 9]

Triacylglycerol lipase III

LIPIII27

400023182

ST4.03ch02

10.09

[5, 9]

Patatin 3

PAT3

400000766

ST4.03ch02

23.7

[36]

Phospholipase A1

PLA1

400010221

ST4.03ch02

32.41

[36]

Phospholipase A1

PLA1

401031759

ST4.03ch02

33.04

[36]

Hydroxyproline-rich glycoprotein family protein

Stl024

400010074

ST4.03ch02

44.53

[9, 17]

Fibrillarin homologue

Stl013

400010119

ST4.03ch03

43.66

[9, 17]

Aspartic protease inhibitor 8

CDI

400009511

ST4.03ch03

44.04

[36]

4-coumarate CoA ligase

4CL

400003155

ST4.03ch03

47.07

[9, 17]

Kunitz-type enzyme inhibitor S9C11

KTEI

400010147

ST4.03ch03

49.39

[36]

Cysteine protease inhibitor 1

STKTI

400010143

ST4.03ch03

49.55

[36]

Cysteine protease inhibitor 1

CPI1

400010139

ST4.03ch03

49.64

[36]

Kunitz-type proteinase inhibitor

KTPI

400009512

ST4.03ch03

49.93

[36]

Aspartic protease inhibitor 5

PKPI-A5

400009513

ST4.03ch03

49.93

[36]

Proteinase inhibitor type-2 P303.51

PIN2K

400004547

ST4.03ch03

50.06

[36]

4-coumarate CoA ligase 2

4CL2

400014223

ST4.03ch03

57.57

[9]\(^*\)

Ci21A protein

CI21A

400006662

ST4.03ch04

60.2

[36]

Annexin p34

AN34

400017714

ST4.03ch04

63.04

[36]

Phenylalanine ammonia-lyase

PAL

400005492

ST4.03ch05

36.35

[5]

Peroxidase

PEROX

400005279

ST4.03ch05

42.52

[5]

Hydroxycinnamoyl quinate CoA transferase

HQT

400011189

ST4.03ch07

1

[5, 9]

Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic

AGPB1

400031084

ST4.03ch07

51.45

[36]

Patatin 05

PAT1-K1

400008749

ST4.03ch08

1.44

[36]

Patatin-2-Kuras 4

PAT2-K4

400014104

ST4.03ch08

1.47

[36]

Patatin-04/09

PAT0409

402017090

ST4.03ch08

1.56

[36]

Patatin group O

PATO

400029247

ST4.03ch08

1.65

[36]

Lipoxygenase

LOX1-ST-2

400020999

ST4.03ch08

6.05

[36]

Catechol oxidase B, chloroplastic

COB

400029575

ST4.03ch08

45.63

[36]

Polyphenol oxidase

PPO

400029576

ST4.03ch08

45.68

[9]\(^*\)

Polyphenol oxidase

PPO

400018924

ST4.03ch08

45.78

[9]\(^*\)

Polyphenol oxidase

PPO

400018919

ST4.03ch08

45.79

[9]\(^*\)

Polyphenol oxidase B, chloroplastic

PPO

400018925

ST4.03ch08

45.84

[9]\(^*\)

Polyphenol oxidase isoform POT32

POT32

400018916

ST4.03ch08

45.87

[9, 36]

Polyphenol oxidase A, chloroplastic

PPO

400018917

ST4.03ch08

45.87

[9]\(^*\)

Polyphenol oxidase

PPO

400018914

ST4.03ch08

45.89

[9]\(^*\)

Polyphenol oxidase

PPO

400018913

ST4.03ch08

45.91

[9]\(^*\)

Glucose-1-phosphate adenylyltransferase

AGPB

400046891

ST4.03ch12

1.23

[36]

Triacylglycerol lipase III

LIPIII27

400007805

ST4.03ch12

1.49

[5, 9]

Triacylglycerol lipase III

LIPIII

400028858

ST4.03ch12

53.25

[5]

Miraculin

KTI-D

400008546

ST4.03ch12

55.09

[36]

  1. * Gene IDs obtained from EnsemblPlant