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Table 2 Sequence length and GC content of different Paeonia groups

From: The plastome reveals new insights into the evolutionary and domestication history of peonies in East Asia

 

Group

Mean

 

CV

 

Plastome

LSC

SSC

IR

 

Plastome

LSC

SSC

IR

Sequence length

Whole

152,741 ± 301

84,402 ± 277

17,016 ± 69

25,662 ± 247

 

0.20%

0.33%

0.41%

0.99%

ONAE

152,227 ± 1

84,261 ± 0

16,679 ± 0

25,644 ± 1

 

0

0

0

0

MOUT_WILD

152,849 ± 441

84,330 ± 392

17,046 ± 22

25,736 ± 373

 

0.29%

0.47%

0.13%

1.46%

MOUT_CULT

152,688 ± 290

84,530 ± 367

17,050 ± 12

25,554 ± 283

 

0.19%

0.44%

0.07%

1.14%

PAEO_WILD

152,709 ± 60

84,383 ± 46

17,014 ± 20

25,656 ± 11

 

0.04%

0.06%

0.12%

0.04%

PAEO_CULT

152,822 ± 236

84,400 ± 31

16,978 ± 23

25,722 ± 132

 

0.15%

0.04%

0.13%

0.51%

GC content

Whole

38.4 ± 0.05%

36.7 ± 0.05%

32.7 ± 0.09%

43.09 ± 0.07%

 

0.13%

0.13%

0.28%

0.17%

ONAE

38.55 ± 0%

36.83 ± 0%

33.02 ± 0%

43.16 ± 0%

 

0

0

0

0

MOUT_WILD

38.37 ± 0.04%

36.68 ± 0.04%

32.64 ± 0.07%

43.05 ± 0.11%

 

0.10%

0.12%

0.22%

0.26%

MOUT_CULT

38.36 ± 0.04%

36.66 ± 0.03%

32.65 ± 0.06%

43.09 ± 0.03%

 

0.09%

0.10%

0.18%

0.07%

PAEO_WILD

38.43 ± 0.01%

36.72 ± 0.01%

32.75 ± 0.04%

43.13 ± 0.02%

 

0.02%

0.03%

0.11%

0.05%

PAEO_CULT

38.43 ± 0.01%

36.74 ± 0.01%

32.72 ± 0.01%

43.1 ± 0.05%

 

0.02%

0.03%

0.04%

0.11%

  1. CV, coefficient of variation; IR, inverted repeat sequence; LSC, large single-copy sequence; SSC, small single-copy sequence