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Fig. 3 | BMC Plant Biology

Fig. 3

From: The genome of Candidatus phytoplasma ziziphi provides insights into their biological characteristics

Fig. 3

Codon usage bias and amino acid composition among 9 phytoplasma species. (A) Based on the RSCU values of all 59 synonymous codons, a heat map was constructed by biclustering to describe the variations in CUB patterns among 9 phytoplasmas. (B) ENc-plot curves were used to explore the influence of GC3s on the CUB patterns of 9 phytoplasmas. 1-Ca. P. oryzae GCA_001578535.1; 2-Ca. P. mali GCA_000026205.1; 3- (Ca. P. australiense) Strawberry lethal yellows phytoplasma (CPA) GCA_00039 7185.1; 4- (Ca. P. asteris) Aster yellows witches’-broom phytoplasma GCA_000012225.1; 5- (Ca. P. asteris) Onion yellows phytoplasma GCA_000009845.1; 6 (Ca. P. vaccinium)Vaccinium witches’-broom phytoplasma GCA_ 000309405.1; 7- (Ca. P. italian) Italian clover phyllody phytoplasma GCA_000300695.1; 8- (Ca. P. ziziphi) JWB phytoplasma (in this study); 9- (Ca. P. aurantifolia) Peanut witches’-broom phytoplasma GCA_000364425.1

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