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Fig. 7 | BMC Plant Biology

Fig. 7

From: Promoter activity and transcriptome analyses decipher functions of CgbHLH001 gene (Chenopodium glaucum L.) in response to abiotic stress

Fig. 7

Characterization of salt stress-related genes induced by CgbHLH001 gene and its promoter. A-C Comparison of B(S) vs C(S); D-F Comparison of A(S) vs B(S); G-I Comparison of A(S) vs C(S). A, D, G GO annotation of DEGs in biological process. B, C, E, F, H, I Heatmaps of selected DEGs related to salt stress based on FPKM values (B, E, H) or log2FC values (C, F, I). In (A, D, G), gene ratio represents the percentage of selected genes, the circle size represents gene numbers, the bigger the circle, the more the gene numbers. The color of circle represents the p value, the darker the color, the smaller the p value with higher significant difference. In (B, E, H), the FPKM values of DEGs were standardized by log2 (FPKM + 1). The darker the color, the higher the gene expression level. The left in (B, E, H) was clustered by gene expression level. The right in (C, F, I) represent gene name, which is consistent with that in (B, E, H). The darker the color, the larger the gene fold change. A: wild type (Col-0); B: 35S::bHLH-overexpressing transgenic Arabidopsis; C: PbHLH::bHLH-overexpressing transgenic Arabidopsis; (C): normal condition; (S): salt treatment

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