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Table 2 Proposed function of genes selected as the molecular signature by integrative analysis of the transcripts and proteins. Component indicates whether the gene contributes to the component 1 or 2 of the multivariate model. Transcript/Protein indicate either the transcript or protein contributes to the Outcome: high or low infestation. The Top Blast hit and description were obtained from the plant protein database. Gene ontology (GO) annotation and Enzyme activity were obtained from the GO database using Blast2Go.denotes proteins/transcripts that were also found to be differentially expressed in Lane et al. 2016 [19]

From: Integrative analysis of green ash phloem transcripts and proteins during an emerald ash borer infestation

Component

Transcript/Protein

Outcome

Transcript ID

Top Blast hit

Top Blast hit description

Go Annotation

Enzyme activity

1

Protein

High

comp45985_c0_seq1

XP_0228429190.1

probable caffeoyl-CoA O-methyltransferase At4g26220

P: methylation

Caffeoyl-CoA O-methyltransferase

1

Protein

High

comp53134_c0_seq2a

XP_0228792430.1

transketolase, chloroplastic-like

P: pentose-phosphate shunt

Transketolase; Formaldehyde transketolase

1

Protein

High

comp53610_c0_seq4

XP_0228935600.1

cationic peroxidase 1-like isoform X2

P: response to oxidative stress

Peroxidase

1

Protein

High

comp54447_c0_seq1

XP_0228534080.1

dirigent protein 22-like

C: apoplast

 

1

Protein

High

comp59303_c1_seq3

XP_0128477040.1

beta-glucosidase 40-like

P: carbohydrate metabolic process

Beta-glucosidase

1

Protein

High

comp60417_c0_seq1a

XP_0150624040.1

kynurenine formamidase isoform X1

P: tryptophan catabolic process to kynurenine

Arylformamidase

1

Protein

High

comp60577_c0_seq1a

XP_0228728610.1

acidic endochitinase-like

P: carbohydrate metabolic process

Chitinase

1

Protein

High

comp64874_c0_seq1

XP_0228522760.1

pectinesterase-like isoform X2

P: pectin catabolic process

Pectinesterase; Carboxylesterase

1

Protein

Low

comp53851_c0_seq1a

XP_0228443000.1

phosphoprotein ECPP44-like

P: response to water

 

1 & 2

Protein

High

comp53180_c0_seq1

XP_0228703950.1

late embryogenesis abundant protein D-29-like

  

1 & 2

Protein

High

comp53477_c0_seq1a

XP_0228639540.1

dirigent protein 22-like

C: extracellular region

 

1 & 2

Protein

High

comp59415_c0_seq2a

XP_0228768020.1

peroxidase 52-like

P: response to oxidative stress;

Peroxidase

1 & 2

Protein

High

comp63717_c1_seq1

XP_0228899110.1

probable aspartyl aminopeptidase

P: chaperone-mediated protein folding

Acting on peptide bonds (peptidases)

1 & 2

Protein

High

comp64621_c0_seq1

XP_0228820390.1

multicopper oxidase LPR2-like

P: oxidation–reduction process

Bilirubin oxidase

1

Transcript

High

comp51972_c0_seq3a

XP_0228440310.1

probable strigolactone esterase DAD2

P: secondary shoot formation

Carboxylesterase

1

Transcript

High

comp61147_c0_seq1a

XP_0228728610.1

acidic endochitinase-like

P: carbohydrate metabolic process

Chitinase

2

Transcript

Low

comp44937_c0_seq1

–-NA–-

   

2

Transcript

Low

comp64810_c0_seq7

XP_0228725640.1

F-box protein At4g00755-like isoform X1