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Table 1 Quality control of transcriptome data

From: Integrated transcriptomics and metabolomics analysis reveals key regulatory network that response to cold stress in common Bean (Phaseolus vulgaris L.)

Sample

Raw Data

Valid Data

Valid Bases

Valid Ratio (Reads)

Q20%

093T_1

37,369,116

36,697,286

5.50G

98.20

99.97

093T_2

50,774,510

50,055,538

7.51G

98.58

99.94

093T_3

40,722,272

39,636,566

5.95G

97.33

99.95

093CK_1

51,300,236

50,294,146

7.54G

98.04

99.81

093CK_2

50,821,910

48,843,450

7.33G

96.11

99.94

093CK_3

39,769,616

38,524,680

5.78G

96.87

99.97

120T_1

48,484,170

45,330,426

6.80G

93.50

99.95

120T_2

44,076,434

36,841,226

5.53G

83.58

99.90

120T_3

46,345,334

45,241,094

6.79G

97.62

99.95

120CK_1

47,207,050

46,442,518

6.97G

98.38

99.93

120CK_2

46,946,322

43,213,188

6.48G

92.05

99.92

120CK_3

51,818,472

49,919,852

7.49G

96.34

99.95