Fig. 5

Alleles analysis of DEGs involved in major pathways with function annotation information and expression pattern between sugarcane varieties SES208 and LA Purple after inoculation with Xanthomonas albilineans. a Alleles analysis of DEGs involved in MAPK signaling pathway, plant-pathogen interaction and plant hormone signal transduction. b Alleles analysis of DEGs in phenylpropanoid biosynthesis, phenylalanine metabolism, flavonoid biosynthesis and terpenoid quinone biosynthesis. The blue font indicates hub genes in Fig. 4. Genes shown in red font exhibited expression of one specific allele. The expression value was calculated by relative expression of genes (log2 Fold Change from − 2 to + 2). SES: SES208; LA: LA Purple. 0 h: uninfected plants; 24 h, 48 h, and 72 h represent 24, 48, and 72 hours post inoculation of sugarcane with X. albilineans, respectively