Table 2 Candidate unigenes involved in anthocyanin and flavonol biosynthesis in rose
From: Metabolic profile and transcriptome reveal the mystery of petal blotch formation in rose
Function | Gene name | Gene abbrevia-tion | Total No. | DEG No. |
|---|---|---|---|---|
Flavonoid synthesis pathway | Chalcone synthase | CHS | 7 | 3 |
Chalcone isomerase | CHI | 7 | 5 | |
Flavanone 3-hydroxylase | F3H | 4 | 2 | |
Flavonoid 3′-hydroxylase | F3’H | 15 | 1 | |
Flavonoid 3′,5′-hydroxylase | F3’5’H | 5 | 0 | |
Dihydroflavonol 4-reductase | DFR | 6 | 2 | |
Anthocyanin synthesis pathway | Anthocyanidin synthase | ANS | 7 | 2 |
UDP-glucose: anthocyanin 3-glucosylltransferase | A3GT | 11 | 3 | |
Anthocyanidin 3-O-glucoside 2″-O-glucosyltransferase Anthocyanidin 3-O-glucoside 6″-O-glucosyltransferase | A3GGT | 7 | 0 | |
Anthocyanidin 5, 3-O-glucosyltransferase | A5, 3GT | 3 | 0 | |
Flavone and flavonol biosynthesis pathway | flavonoid 3-glucosyltransferase | F3GT | 4 | 0 |
UDP-glucose flavonoid 3-O-glucosyltransferase | 52 | 6 | ||
UDP-glucose: flavonol 3-glucosyltransferase | 3 | 0 | ||
Flavonol synthase | FLS | 12 | 4 | |
Transcription factors | AP2/B3 transcription factor family protein | AP2 | 13 | 1 |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein | bHLH | 63 | 7 | |
Dof-type zinc finger DNA-binding family protein | DOF | 13 | 3 | |
myb domain protein | MYB | 85 | 9 | |
NAC domain containing protein | NAC | 119 | 8 | |
TCP domain protein | TCP | 9 | 3 | |
Transducin/WD40 repeat-like superfamily protein | WD40 | 235 | 6 | |
WRKY DNA-binding protein | WRKY | 55 | 6 |