Table 1 GO terms enriched with an FE > 2, using up-DEGs as input
GO | cytTC221 | cytT248 | TC243 |
|---|---|---|---|
Biological process | |||
protein complex oligomerization (GO:0051259) | ✓ | ✓ | ✓ |
chaperone cofactor-dependent protein refolding (GO:0051085) | ✓ | ✓ | ✓ |
de novo’ posttranslational protein folding (GO:0051084) | ✓ | ✓ | ✓ |
protein refolding (GO:0042026) | ✓ | ✓ | ✓ |
de novo’ protein folding (GO:0006458) | ✓ | ✓ | ✓ |
protein folding (GO:0006457) | ✓ | ✓ | ✓ |
response to heat (GO:0009408) | ✓ | ✓ | ✓ |
response to salt stress (GO:0009651) | ✓ | ✓ | ✓ |
protein localization to endoplasmic reticulum (GO:0070972) | ✓ | ✓ | ✓ |
chaperone-mediated protein folding (GO:0061077) | ✓ | ✓ | ✓ |
response to osmotic stress (GO:0006970) | ✓ | ✓ | ✓ |
protein import into mitochondrial matrix (GO:0030150) | ✓ | ||
protein targeting to mitochondrion (GO:0006626) | ✓ | ||
protein localization to mitochondrion (GO:0070585) | ✓ | ||
establishment of protein localization to mitochondrion (GO:0072655) | ✓ | ||
response to organonitrogen compound (GO:0010243) | ✓ | ||
cytoplasmic translation (GO:0002181) | ✓ | ||
tRNA aminoacylation (GO:0043039) | ✓ | ||
amino acid activation (GO:0043038) | ✓ | ||
translational elongation (GO:0006414) | ✓ | ||
mitochondrial transport (GO:0006839) | ✓ | ||
maintenance of protein localization in organelle (GO:0072595) | ✓ | ||
cellular response to topologically incorrect protein (GO:0035967) | ✓ | ||
response to topologically incorrect protein (GO:0035966) | ✓ | ||
intracellular protein transmembrane transport (GO:0065002) | ✓ | ||
arginine metabolic process (GO:0006525) | ✓ | ✓ | |
proteasomal ubiquitin-independent protein catabolic process (GO:0010499) | ✓ | ✓ | |
ubiquitin-dependent ERAD pathway (GO:0030433) | ✓ | ✓ | |
ERAD pathway (GO:0036503) | ✓ | ✓ | |
protein transmembrane transport (GO:0071806) | ✓ | ✓ | |
maintenance of protein localization in endoplasmic reticulum (GO:0035437) | ✓ | ✓ | |
Molecular function | |||
unfolded protein binding (GO:0051082) | ✓ | ✓ | ✓ |
Protein self-association (GO:0043621) | ✓ | ||
chaperone binding (GO:0051087) | ✓ | ✓ | |
Cellular component | |||
proteasome complex (GO:0000502) | ✓ | ✓ | ✓ |
endopeptidase complex (GO:1905369) | ✓ | ✓ | ✓ |
Sm-like protein family complex (GO:0120114) | ✓ | ✓ | ✓ |
spliceosomal snRNP complex (GO:0097525) | ✓ | ✓ | ✓ |
small nuclear ribonucleoprotein complex (GO:0030532) | ✓ | ✓ | ✓ |
U2 snRNP (GO:0005686) | ✓ | ||
organellar ribosome (GO:0000313) | ✓ | ||
transcription elongation factor complex (GO:0008023) | ✓ | ||
catalytic step 2 spliceosome (GO:0071013) | ✓ | ||
proton-transporting two-sector ATPase complex (GO:0016469) | ✓ | ✓ | |
proteasome core complex (GO:0005839) | ✓ | ✓ | |