Skip to main content

Table 2 Downregulated differentially expressed genes in regions of interest in resistant and susceptible cowpea

From: Transcriptome analysis of aphid-resistant and susceptible near isogenic lines reveals candidate resistance genes in cowpea (Vigna unguiculata)

Chromosome

Chromosome location

Locus Name

Arabidopsis ID

Rice ID

General description

Cowpea line

Contrast

LFC

Vu02

24,527,133–24,529,115

Vigun02g090300

AT5G46790

LOC_Os10g42280

cyclase/dehydrase family protein, putative, expressed/REGULATORY COMPONENTS OF ABA RECEPTOR 12

Resistant

AphidResD6

-1.09

Vu02

25,088,659–25,091,739

Vigun02g095300

AT1G32170

LOC_Os02g03550

glycosyl hydrolases family 16, putative, expressed/XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 30

Resistant

AphidResD1

-0.96

Vu02

25,281,475–25,283,889

Vigun02g097000

AT1G31920

LOC_Os02g46980

pentatricopeptide, putative, expressed/Pentatricopeptide repeat-containing protein

Resistant

AphidResD6

-1.27

Vu02

25,295,229–25,295,454

Vigun02g097200

NA

NA

NA

Resistant

AphidResD1

-3.91

Vu02

25,986,925–25,987,906

Vigun02g105500

AT2G41342

NA

Uncharacterized protein

Resistant

AphidResD6

-1.97

Vu02

26,014,360–26,015,720

Vigun02g106000

NA

NA

NA

Resistant

AphidResD6

-0.96

Vu02

26,603,320–26,607,301

Vigun02g111900

NA

NA

NA

Resistant

AphidResD6

-0.74

Vu05

3,884,709–3,887,992

Vigun05g046400

AT3G60390

LOC_Os10g41230

homeobox associated leucine zipper, putative, expressed/Homeobox-leucine zipper protein HAT3

Resistant

AphidResD6

-1.44

Vu05

4,194,856–4,199,405

Vigun05g048800

AT1G35710

NA

kinase family with leucine-rich repeat domain-containing protein

Resistant

AphidResD6

-2.79

Vu05

4,360,865–4,362,890

Vigun05g050900

AT2G44740

LOC_Os10g41430

cyclin, putative, expressed/CYCLIN P4;1

Resistant

AphidResD6

-1.68

Vu05

4,416,033–4,419,347

Vigun05g051600

AT5G48370

LOC_Os09g34190

acyl-coenzyme A thioesterase 10, mitochondrial precursor, putative, expressed/Thioesterase/thiol ester dehydrase-isomerase superfamily protein

Resistant

AphidResD1

-0.68

Vu02

24,637,099–24,637,783

Vigun02g091400

AT1G32690

LOC_Os02g46620

expressed protein/DUF740 family protein

Susceptible

AphidSuscD1

-0.63

Vu02

24,760,762–24,763,564

Vigun02g092400

AT4G17790

LOC_Os02g46660

SNARE associated Golgi protein, putative, expressed

Susceptible

AphidSuscD1

-0.64

Vu02

25,651,668–25,656,208

Vigun02g101900

AT4G19140

LOC_Os04g51166

expressed protein/exopolysaccharide production negative regulator

Susceptible

AphidSuscD1

-0.66

Vu02

26,014,360–26,015,720

Vigun02g106000

NA

NA

NA

Susceptible

AphidSuscD1

-1.01

Vu02

26,466,136–26,473,697

Vigun02g110900

AT3G51520

LOC_Os02g48350

diacylglycerol O-acyltransferase, putative, expressed/DIACYLGLYCEROL ACYLTRANSFERASE 2

Susceptible

AphidSuscD1

-0.81

Vu05

4,360,865–4,362,890

Vigun05g050900

AT2G44740

LOC_Os10g41430

cyclin, putative, expressed/cyclin p4;1

Susceptible

AphidSuscD1

-1.20

Vu05

4,487,115–4,489,745

Vigun05g052500

AT1G44750

LOC_Os02g46380

purine permease, putative, expressed/purine permease 11

Susceptible

AphidSuscD1

-0.63

Vu05

4,505,968–4,507,948

Vigun05g052700

AT3G60200

LOC_Os02g46420

transposon protein, putative, unclassified, expressed/Uncharacterized protein

Susceptible

AphidSuscD1

-1.18