Table 2 Proteins associated with high somatic embryogenesis potential of Eucalyptus
From: Proteome profiles during early stage of somatic embryogenesis of two Eucalyptus species
PriteinID | E. camaldulensis | E. grandis x urophylla | A2 vs B2a | Annotation | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
log2FC | adj_pvalue | Regulation | log2FC | adj_pvalue | Regulation | log2FC | adj_pvalue | Regulation | ||
XP_010033729.1 | 1.53 | 4.73E-08 | Up | -1.09 | 1.10E-05 | Down | 1.17 | 3.60E-05 | Up | linoleate 13S-lipoxygenase 3–1, chloroplastic |
XP_010057953.1 | 1.47 | 3.38E-02 | Up | -1.76 | 1.52E-02 | Down | 2.24 | 1.24E-02 | Up | FT-interacting protein 1 |
XP_010028309.1 | 1.28 | 2.02E-05 | Up | -1.84 | 1.59E-07 | Down | 1.22 | 3.16E-04 | Up | salicylic acid-binding protein 2 |
XP_010060812.1 | 1.69 | 1.58E-07 | Up | -1.14 | 5.81E-05 | Down | 1.80 | 1.12E-06 | Up | probable glutathione S-transferase |
XP_010059887.1 | 2.95 | 1.51E-04 | Up | -3.59 | 7.22E-05 | Down | 3.48 | 5.96E-04 | Up | isoflavone 3'-hydroxylase |
XP_010031113.1 | 2.43 | 8.95E-09 | Up | -1.63 | 6.57E-06 | Down | 0.25 | 5.83E-01 | NC | peroxidase 4-like |
XP_010024060.1 | 3.62 | 1.90E-13 | Up | -1.03 | 2.15E-04 | Down | 0.68 | 2.78E-02 | NC | uncharacterized protein LOC104414606 |
XP_010045407.1 | 2.49 | 9.97E-07 | Up | -1.86 | 7.48E-05 | Down | 0.71 | 1.79E-01 | NC | peroxidase 4-like |
XP_010046552.1 | 1.19 | 2.45E-03 | Up | -1.49 | 3.25E-04 | Down | 0.75 | 2.60E-02 | NC | 2-alkenal reductase (NADP( +)-dependent) |
XP_010056500.1 | 1.02 | 9.78E-03 | Up | 0.51 | 2.01E-01 | NC | -2.08 | 7.20E-05 | Down | 3-hydroxyisobutyryl-CoA hydrolase 1 isoform X3 |
XP_018727807.1 | 1.55 | 2.70E-02 | Up | -0.04 | 9.64E-01 | NC | -1.97 | 2.32E-02 | Down | thaumatin-like protein 1 |
XP_010043457.1 | 1.29 | 6.78E-04 | Up | 0.72 | 2.63E-02 | NC | -1.97 | 1.37E-05 | Down | uncharacterized protein LOC104432666 |
XP_010047147.1 | 1.18 | 2.38E-02 | Up | 0.39 | 4.75E-01 | NC | -1.93 | 3.16E-03 | Down | chitotriosidase-1 |
XP_010069582.1 | 1.68 | 2.56E-04 | Up | 0.85 | 4.84E-02 | NC | -1.90 | 4.82E-04 | Down | adrenodoxin-like protein, mitochondrial |
XP_010062408.1 | 1.26 | 1.44E-02 | Up | 0.93 | 7.23E-02 | NC | -1.40 | 2.66E-02 | Down | protein AIG1 |
XP_010025044.1 | 1.87 | 2.30E-09 | Up | 0.18 | 4.09E-01 | NC | -1.10 | 1.03E-04 | Down | probable aldo–keto reductase 1 |
XP_010050124.1 | 1.24 | 1.73E-03 | Up | 0.69 | 7.24E-02 | NC | -1.04 | 2.61E-02 | Down | protein S-acyltransferase 24 |
XP_010055498.1 | 2.01 | 2.71E-05 | Up | 1.14 | 5.35E-02 | NC | 1.01 | 4.93E-02 | Up | uncharacterized protein LOC104443686 isoform X1 |
XP_018715473.1 | 1.73 | 9.53E-05 | Up | 0.95 | 1.87E-02 | NC | 1.05 | 3.05E-02 | Up | uncharacterized protein LOC104416785 |
XP_018731692.1 | 1.23 | 5.18E-04 | Up | -0.86 | 9.72E-03 | NC | 1.05 | 9.14E-03 | Up | probable WRKY transcription factor 40 |
XP_010024431.1 | 2.31 | 0.00E + 00 | Up | 0.42 | 3.17E-03 | NC | 1.07 | 3.15E-07 | Up | endo-1,3;1,4-beta-D-glucanase |
XP_010029034.1 | 1.38 | 2.36E-05 | Up | 0.25 | 3.95E-01 | NC | 1.07 | 2.73E-03 | Up | lysine histidine transporter 1 |
XP_010060835.1 | 1.91 | 1.08E-07 | Up | 0.93 | 1.48E-03 | NC | 1.10 | 1.40E-03 | Up | beta-amyrin 28-oxidase |
XP_010051591.1 | 1.48 | 6.68E-05 | Up | 0.22 | 5.40E-01 | NC | 1.11 | 6.72E-03 | Up | isopentenyl-diphosphate Delta-isomerase I |
XP_010027995.1 | 1.93 | 4.55E-05 | Up | 0.62 | 1.40E-01 | NC | 1.13 | 2.71E-02 | Up | LIM domain-containing protein WLIM1 |
XP_018726486.1 | 1.27 | 2.53E-04 | Up | 0.11 | 7.47E-01 | NC | 1.17 | 3.30E-03 | Up | calcium-transporting ATPase 8, plasma membrane-type isoform X2 |
XP_010052498.1 | 1.55 | 5.52E-06 | Up | 0.65 | 2.63E-02 | NC | 1.22 | 8.46E-04 | Up | ATP-dependent 6-phosphofructokinase 2 |
XP_010060536.1 | 1.77 | 1.72E-05 | Up | 0.20 | 6.03E-01 | NC | 1.31 | 3.35E-03 | Up | stem-specific protein TSJT1 |
XP_010067225.1 | 1.42 | 1.26E-04 | Up | -0.80 | 1.96E-02 | NC | 1.32 | 1.84E-03 | Up | ABC transporter G family member 6 |
XP_010070437.1 | 6.06 | 0.00E + 00 | Up | 0.67 | 6.26E-02 | NC | 1.34 | 2.60E-03 | Up | 2-alkenal reductase (NADP( +)-dependent) |
XP_010066562.1 | 1.88 | 1.45E-10 | Up | -0.78 | 1.61E-04 | NC | 1.34 | 1.09E-06 | Up | probable S-adenosylmethionine-dependent methyltransferase At5g38780 |
XP_010026302.1 | 2.06 | 3.73E-05 | Up | 0.74 | 1.13E-01 | NC | 1.37 | 9.19E-03 | Up | uncharacterized protein LOC104416642 isoform X1 |
XP_010052253.1 | 1.89 | 1.30E-03 | Up | 0.56 | 2.63E-01 | NC | 1.41 | 2.14E-02 | Up | OPA3-like protein |
XP_010036163.1 | 1.32 | 6.93E-03 | Up | 0.56 | 2.59E-01 | NC | 1.42 | 1.71E-02 | Up | mitochondrial import receptor subunit TOM9-2 |
XP_010036356.1 | 1.83 | 4.12E-04 | Up | 0.07 | 8.88E-01 | NC | 1.43 | 2.16E-02 | Up | pentatricopeptide repeat-containing protein At1g80270, mitochondrial |
XP_010062288.1 | 2.39 | 3.98E-11 | Up | 0.93 | 1.48E-04 | NC | 1.51 | 2.08E-06 | Up | centromere protein V |
XP_010034975.1 | 2.15 | 5.19E-05 | Up | 0.48 | 2.59E-01 | NC | 1.51 | 3.97E-03 | Up | uncharacterized protein LOC104424307 |
XP_010036195.1 | 1.37 | 6.07E-03 | Up | -0.58 | 2.44E-01 | NC | 1.56 | 9.94E-03 | Up | short-chain type dehydrogenase/reductase |
XP_010066560.1 | 2.46 | 5.25E-07 | Up | -0.04 | 9.21E-01 | NC | 1.57 | 1.35E-03 | Up | probable S-adenosylmethionine-dependent methyltransferase At5g37990 |
XP_010061568.1 | 1.48 | 4.01E-04 | Up | 0.28 | 4.87E-01 | NC | 1.59 | 1.23E-03 | Up | protein odr-4 homolog |
XP_010044325.1 | 2.50 | 1.44E-04 | Up | 0.38 | 5.40E-01 | NC | 1.62 | 2.57E-02 | Up | uncharacterized protein LOC104433329 |
XP_010047608.1 | 1.30 | 1.90E-03 | Up | 0.00 | 9.99E-01 | NC | 1.71 | 9.55E-04 | Up | uncharacterized protein LOC104436511 |
XP_010041421.1 | 4.02 | 2.79E-10 | Up | -0.07 | 7.84E-01 | NC | 1.72 | 5.31E-06 | Up | uncharacterized protein LOC104430386 |
XP_010066967.1 | 2.91 | 1.92E-04 | Up | 0.92 | 1.55E-01 | NC | 1.75 | 3.29E-02 | Up | zinc finger CCCH domain-containing protein 17 |
XP_010065959.1 | 1.48 | 1.14E-02 | Up | 0.35 | 5.74E-01 | NC | 1.79 | 1.25E-02 | Up | uncharacterized protein LOC104453135 |
XP_010060762.1 | 1.18 | 4.81E-02 | Up | 0.16 | 8.31E-01 | NC | 1.81 | 1.58E-02 | Up | zinc finger BED domain-containing protein RICESLEEPER 1-like |
XP_010057715.1 | 2.00 | 8.42E-05 | Up | -0.64 | 1.58E-01 | NC | 1.85 | 1.32E-03 | Up | geraniol 8-hydroxylase |
XP_010024749.1 | 2.17 | 2.74E-13 | Up | -0.26 | 3.91E-02 | NC | 1.86 | 2.16E-10 | Up | major allergen Pru ar 1 |
XP_010034146.1 | 1.65 | 2.00E-03 | Up | -0.07 | 9.12E-01 | NC | 1.91 | 3.33E-03 | Up | pentatricopeptide repeat-containing protein At3g56030-like |
XP_010070074.1 | 1.35 | 1.35E-03 | Up | -0.36 | 5.44E-01 | NC | 1.97 | 2.14E-04 | Up | glucose-6-phosphate 1-dehydrogenase 4, chloroplastic |
XP_010031250.1 | 1.73 | 6.56E-04 | Up | -0.09 | 8.68E-01 | NC | 2.04 | 8.27E-04 | Up | UDP-glycosyltransferase 89B1 |
XP_010069584.1 | 1.23 | 1.00E-02 | Up | -0.31 | 5.42E-01 | NC | 2.18 | 3.50E-04 | Up | uncharacterized protein LOC104456478 |
XP_010024433.1 | 2.13 | 3.11E-10 | Up | 0.49 | 2.61E-02 | NC | 2.23 | 5.69E-09 | Up | endo-1,3;1,4-beta-D-glucanase |
XP_010049304.1 | 3.30 | 6.42E-04 | Up | 0.72 | 4.41E-01 | NC | 2.42 | 2.92E-02 | Up | pectinesterase/pectinesterase inhibitor PPE8B |
XP_018731179.1 | -1.11 | 2.74E-02 | Down | 1.34 | 1.08E-02 | Up | -0.73 | 2.77E-01 | NC | glycerophosphodiester phosphodiesterase GDPDL3 |
XP_018727022.1 | -1.38 | 1.37E-03 | Down | 1.02 | 1.64E-02 | Up | 0.42 | 4.79E-01 | NC | 12-oxophytodienoate reductase 3 |
XP_010063266.1 | -1.75 | 2.37E-03 | Down | 1.41 | 1.36E-02 | Up | -1.04 | 1.38E-01 | NC | fasciclin-like arabinogalactan protein 1 |
XP_010026892.1 | -2.03 | 4.68E-03 | Down | 1.92 | 7.87E-03 | Up | -0.88 | 3.61E-01 | NC | probable pectate lyase 18 |
XP_010050122.1 | -1.43 | 7.89E-03 | Down | 1.25 | 2.25E-03 | Up | -2.82 | 2.46E-04 | Down | heparanase-like protein 3 isoform X1 |
XP_010043384.1 | -1.85 | 1.20E-02 | Down | 1.12 | 3.30E-02 | Up | -1.83 | 4.26E-02 | Down | stress-response A/B barrel domain-containing protein HS1 |
XP_010054106.1 | -19.37 | 1.34E-02 | Down | 3.67 | 6.62E-01 | NC | -19.61 | 4.15E-02 | Down | secretory carrier-associated membrane protein 4 isoform X1 |
XP_010029197.1 | -4.07 | 1.83E-05 | Down | -0.49 | 5.50E-01 | NC | -3.64 | 5.26E-04 | Down | 2-methylene-furan-3-one reductase |
XP_010035550.1 | -1.07 | 2.58E-05 | Down | -0.19 | 3.31E-01 | NC | -2.70 | 3.49E-09 | Down | stem-specific protein TSJT1 isoform X2 |
XP_010045004.1 | -3.41 | 4.36E-09 | Down | 0.65 | 1.11E-01 | NC | -2.61 | 4.85E-06 | Down | DNA-damage-repair/toleration protein DRT100 |
XP_010032296.1 | -3.26 | 2.27E-06 | Down | -0.87 | 8.52E-02 | NC | -2.61 | 3.37E-04 | Down | NADPH:quiNC oxidoreductase |
XP_010029700.1 | -1.90 | 1.47E-04 | Down | 0.83 | 1.29E-01 | NC | -2.45 | 1.40E-03 | Down | histone H1 |
XP_010029991.1 | -2.37 | 1.94E-09 | Down | -0.35 | 1.65E-01 | NC | -2.00 | 5.59E-07 | Down | gamma-glutamyl peptidase 5 |
XP_010037786.1 | -1.45 | 9.29E-03 | Down | 0.06 | 9.23E-01 | NC | -1.94 | 5.17E-03 | Down | putative receptor protein kinase ZmPK1 |
XP_010067858.1 | -1.71 | 5.96E-05 | Down | 0.65 | 8.14E-02 | NC | -1.90 | 1.54E-04 | Down | uncharacterized protein LOC104454644 |
XP_010053269.1 | -1.30 | 2.57E-04 | Down | 0.27 | 4.28E-01 | NC | -1.86 | 3.39E-05 | Down | probable glutathione peroxidase 8 |
XP_010036808.1 | -2.75 | 6.99E-08 | Down | -0.66 | 8.68E-02 | NC | -1.80 | 2.86E-04 | Down | CASP-like protein 1D1 |
XP_018733288.1 | -1.43 | 4.53E-06 | Down | -0.05 | 8.86E-01 | NC | -1.79 | 1.13E-04 | Down | uncharacterized protein LOC104454184 |
XP_010035642.1 | -1.09 | 1.04E-07 | Down | -0.36 | 2.26E-02 | NC | -1.76 | 1.02E-09 | Down | universal stress protein PHOS34-like isoform X1 |
XP_010036760.1 | -1.11 | 1.43E-02 | Down | -0.07 | 8.89E-01 | NC | -1.74 | 2.09E-03 | Down | cysteine-rich repeat secretory protein 55 |
XP_010049875.1 | -1.12 | 2.08E-02 | Down | 0.24 | 6.34E-01 | NC | -1.73 | 4.98E-03 | Down | protein ENHANCED DISEASE RESISTANCE 2-like isoform X2 |
XP_010060626.1 | -1.27 | 1.25E-05 | Down | 0.21 | 4.27E-01 | NC | -1.69 | 2.86E-06 | Down | D-amino-acid transaminase, chloroplastic |
XP_010026751.1 | -1.38 | 7.59E-07 | Down | 0.08 | 7.54E-01 | NC | -1.61 | 1.14E-06 | Down | isoflavone reductase-like protein isoform X1 |
XP_010041384.1 | -2.07 | 9.97E-06 | Down | -0.77 | 5.03E-02 | NC | -1.59 | 1.40E-03 | Down | protein SRC2 homolog |
XP_010053918.1 | -1.69 | 7.45E-03 | Down | 0.43 | 3.40E-01 | NC | -1.53 | 5.09E-03 | Down | flavin-containing monooxygenase FMO GS-OX5 |
XP_010044557.2 | -1.19 | 4.95E-03 | Down | 0.25 | 5.68E-01 | NC | -1.53 | 3.00E-03 | Down | uncharacterized protein LOC104433492 |
XP_010053674.1 | -1.38 | 2.12E-05 | Down | 0.43 | 1.37E-01 | NC | -1.47 | 9.56E-05 | Down | ( +)-neomenthol dehydrogenase |
XP_010060965.1 | -1.05 | 3.27E-03 | Down | -0.15 | 6.53E-01 | NC | -1.44 | 1.03E-03 | Down | isoflavone reductase-like protein |
XP_010066016.1 | -1.39 | 3.59E-05 | Down | -0.67 | 2.80E-02 | NC | -1.42 | 2.50E-04 | Down | methylcrotonoyl-CoA carboxylase beta chain, mitochondrial |
XP_010062143.1 | -2.56 | 1.12E-08 | Down | -0.79 | 9.21E-03 | NC | -1.38 | 9.37E-04 | Down | uncharacterized protein LOC104449618 isoform X1 |
XP_010046044.1 | -2.21 | 4.18E-06 | Down | -0.08 | 8.58E-01 | NC | -1.35 | 6.26E-03 | Down | plasma membrane-associated cation-binding protein 2 |
XP_010051889.1 | -1.21 | 8.38E-06 | Down | -0.05 | 8.98E-01 | NC | -1.27 | 1.63E-03 | Down | uncharacterized protein LOC104440663 |
XP_010053265.2 | -1.44 | 1.78E-04 | Down | 0.03 | 9.44E-01 | NC | -1.21 | 5.14E-03 | Down | probable xyloglucan endotransglucosylase/hydrolase protein 16 |
XP_010053670.1 | -1.35 | 3.28E-04 | Down | 0.26 | 3.80E-01 | NC | -1.19 | 7.65E-03 | Down | ( +)-neomenthol dehydrogenase |
XP_010061259.1 | -1.17 | 3.47E-04 | Down | -0.58 | 5.76E-02 | NC | -1.14 | 2.73E-03 | Down | low-temperature-induced cysteine proteinase |
XP_010054042.1 | -1.09 | 1.79E-03 | Down | -0.77 | 2.53E-02 | NC | -1.09 | 8.64E-03 | Down | 60S ribosomal protein L13-2 |
XP_010045283.1 | -1.80 | 4.59E-09 | Down | -0.03 | 9.14E-01 | NC | -1.08 | 1.26E-04 | Down | serine carboxypeptidase-like 51 |
XP_010047621.1 | -1.31 | 1.99E-03 | Down | -0.64 | 1.24E-01 | NC | -1.03 | 4.05E-02 | Down | 60S ribosomal protein L31 |
XP_010036132.1 | -1.39 | 3.34E-11 | Down | -0.71 | 4.11E-06 | NC | -1.03 | 2.08E-07 | Down | alcohol dehydrogenase class-3 |
XP_010026802.1 | -1.11 | 1.40E-03 | Down | -0.85 | 1.26E-02 | NC | -1.01 | 1.36E-02 | Down | 60S ribosomal protein L7a-1 |
XP_010051871.1 | -1.36 | 8.88E-05 | Down | -0.97 | 2.16E-03 | NC | 1.14 | 2.77E-03 | Up | reticuline oxidase-like protein |
XP_010056883.1 | -1.68 | 2.45E-03 | Down | -0.92 | 1.30E-01 | NC | 2.10 | 4.74E-03 | Up | uncharacterized protein At2g34460, chloroplastic isoform X1 |