Table 3 Haplotype blocks, number of markers in haplotype block (NMHB), chromosome (Chr), haplotype block (HB) size, haplotype allele and favorable allele regarding Pro and H₂O₂ accumulation under drought stress and for the STI

Pro_dro

Pro_1A_Hap1

3

1A

404,126

TGT: CTC

CTC

Pro_1A_Hap2

6

1A

10,436

ACCTGG: GTTGGT

GTTGGT

Pro_1A_Hap3

6

1A

197,978

CCAAAT: CCGGCT

CCAAAT

Pro_3B_Hap1

4

3B

1281

GGCG: AGCG

AGCG

Pro_3B_Hap2

6

3B

197,149

CGCCCG: CGTCCG

CGTCCG

Pro_4A_Hap1

13

4A

2,587,578

GCCTAATCCTGTC:

GCCTAATCTTGTC

GCCTAATCCTGTC

Pro_4A_Hap2

4

4A

75,535

CCTA: TTCG

TTCG

Pro_4A_Hap3

5

4A

1,780,008

ACTTG: GACCA

ACTTG

Pro_6D_Hap1

3

6D

292,341

CGT: TAC

TAC

Pro_7B_Hap1

4

7B

631,054

CTAG: CTGA

CTGA

Pro_STI

Pro_3B_Hap3

3

3B

2175

AGG: GGA

GGA

Pro_3B_Hap4

7

3B

1,050,651

AGCATGC: CAAGCAC

AGCATGC

Pro_4B_Hap1

20

4B

2,493,409

CACCCTACTCTGCGTATGTG:

TGTTTCGTCTCTTACGCTCA

CACCCTACTCTGCGTATGTG

Pro_4B_Hap2

8

4B

332,843

AAATTATG: CGGCCGCA

AAATTATG

Pro_5A_Hap1

11

5A

408,220

CGCCATTAACG:

TATAGCCGGTA

CGCCATTAACG

Pro_5B_Hap1

6

5B

787,764

GCCCAC: ATATGC

ATATGC

Pro_5B_Hap2

4

5B

284,390

GTGG: TGAA

TGAA

Pro_5B_Hap3

8

5B

2,005,360

AGCGTAAT: CATAGCGG

CATAGCGG

Pro_5B_Hap4

8

5B

2,619,512

CGACGACC: TAGTGGTT

TAGTGGTT

Pro_5B_Hap5

4

5B

7048

GGAT: AGGC

AGGC

Pro_5B_Hap6

18

5B

3,739,633

CAATCATATATCTCCAAG: TGGCCATCCGCTCATCGG

TGGCCATCCGCTCATCGG

Pro_5B_Hap7

18

5B

933,082

CTCCCCCGCTGTAACACA: CTCCCCCGCTGTAACATA

CTCCCCCGCTGTAACACA

H₂O_{2_} STI

HP_{_}1B_Hap1

3

1B

24,816

GTA: ACG

ACG

HP_{_}1B_Hap2

3

1B

9056

CGA: AAG

AAG

HP _{_}2B_Hap1

11

2B

2,193,600

GCGCTGTTTGT: ATATCACCCAT

ATATCACCCAT

HP _{_}2B_Hap2

6

2B

3,877,092

AATCCG: CATCCG

AATCCG

HP _{_}2D_Hap1

3

2D

1,304,253

ACC: GTC

GTC

HP _{_}6D_Hap1

4

6D

21,999

ACCC: GTTT

GTTT