Table 2 Marker, chromosome (Chr), position, P-value, phenotypic variation (PV), allele, favorable (Fav.) allele, T-test value regarding Pro and H₂O₂ accumulation under drought stress and for the STI of Pro and H₂O₂

Pro_dro

RFL_Contig1027_442

1A

8,244,106

3.48E-05

5.51

A:G

G

0.02

AX-158569423

1A

8,248,738

8.81E-05

5.0

G:A

A

0.03

BS00084022_51

1A

31,781,700

9.57E-04

3.42

T:C

T

0.02

CAP12_rep_c3868_270

3B

986,619

9.42E-04

3.41

C:A

A

0.03

AX-158541844

3B

20,538,743

6.95E-05

5.11

G:T

T

< 0.01

AX-158538340

3B

20,717,449

8.92E-04

3.52

A:G

G

< 0.01

AX-158541844

3B

20,538,743

6.95E-05

5.12

G:T

T

< 0.01

AX-158538340

3B

20,717,449

8.92E-04

3.51

A:G

G

< 0.01

AX-158541845

3B

20,718,475

1.60E-04

4.72

G:A

A

0.01

AX-111526074

3B

20,719,624

1.60E-04

4.71

G:A

A

< 0.01

BS00009970_51

4A

45,338,226

3.46E-04

4.13

T:C

T

< 0.01

AX-111497637

4A

46,292,909

5.82E-05

5.21

C: T

C

< 0.01

wsnp_Ex_c57094_58953404

5A

9,657,523

3.30E-04

4.11

A:G

G

< 0.01

Excalibur_c2991_320

6D

469,919,670

1.25E-04

4.62

C:T

C

< 0.01

Pro_STI

AX-110412102

2A

775,936,337

1.07E-04

9.42

A:G

G

< 0.01

AX-158540981

2B

632,394,417

5.82E-04

6.73

A:G

G

< 0.01

AX-158523479

3A

712,134,412

8.94E-04

6.33

C:T

T

< 0.01

BS00003522_51

3B

432,844,940

5.91E-04

6.72

A:G

G

< 0.01

Ku_c1575_338

3B

726,481,592

7.93E-04

7.41

G:A

G

0.02

AX-158550762

5A

451,456,903

8.66E-04

6.32

T:C

T

0.03

Jagger_c3991_101

5B

488,820,722

1.33E-04

8.33

T:C

C

< 0.01

GENE_3437_148

5B

489,280,672

1.59E-05

10.81

T:C

C

< 0.01

AX-158525047

5B

490,619,499

7.52E-06

12.12

C:T

T

< 0.01

H₂O₂_dro

AX-158557366

2A

749,105,336

3.95E-05

10.17

A:G

G

< 0.01

wsnp_JD_c9360_10216330

3B

610,751,737

6.08E-04

6.82

C:T

T

< 0.01

AX-158557258

2A

751,013,994

8.12E-04

7.33

G:T

T

< 0.01

H₂O₂_STI

AX-111649657

1B

614,277,801

8.74E-04

6.31

A:G

G

< 0.01

AX-89670926

1B

614,293,304

6.68E-04

6.62

G:A

G

< 0.01

AX-86183817

1B

614,452,475

6.50E-04

6.64

G:A

G

< 0.01

AX-110434034

1B

614,612,411

5.83E-04

6.75

C:T

T

< 0.01

AX-158602322

2A

34,152,277

5.20E-04

6.88

A:G

G

< 0.01

AX-158596005

2A

751,004,758

8.52E-04

6.85

C:T

T

< 0.01

Kukri_c30020_302

2A

751,094,015

2.10E-04

8.33

C:T

T

< 0.01

Excalibur_c9752_289

2B

760,950,856

5.06E-04

6.91

C:T

T

< 0.01

AX-158597023

2B

761,322,528

5.06E-04

6.91

C:T

T

< 0.01

AX-158596842

2B

800,060,795

4.34E-04

7.23

G:A

A

< 0.01

BobWhite_c11059_169

2D

32,053,537

5.65E-04

6.82

A:C

C

< 0.01

Tdurum_contig42636_995

5B

491,957,849

9.70E-04

6.22

C:T

T

< 0.01