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Fig. 4 | BMC Plant Biology

Fig. 4

From: Flooding and herbivory: the effect of concurrent stress factors on plant volatile emissions and gene expression in two heirloom tomato varieties

Fig. 4

K-means clustering analysis of genes differentially expressed between flooded tomato plants and non-flooded controls (fold-change > 8 and; FDR p-value < 0.01). CP: Cherokee Purple, SG: Striped German. The heatmap has treatments as columns and genes as rows. The top right inset shows the color scale for log2 counts per million (CPM) values with purple tones for up-regulated genes and yellow tones for down-regulated genes. The vertical striped line on dendrogram shows the level at which the tree was cut to separate groups based on k-means. Each separate cluster was named according to figure number followed by and alphabetic character. Each cluster gene content is described in detail in the text

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BMC Plant Biology

ISSN: 1471-2229

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