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Table 2 Differential expression of known TFS in each comparison group

From: Transcriptomic and metabolomic profiling of flavonoid biosynthesis provides novel insights into petals coloration in Asian cotton (Gossypium arboreum L.)

GeneID

TFs name

Description

Correlation with total anthocyanin

p-value

W_Flo

Y_Flo

P_Flo

W_Flo vs Y_Flo

W_Flo vs P_Flo

Y_Flo vs P_Flo

Log2FC

Type

Fdr

Log2FC

Type

Fdr

Log2FC

Type

Fdr

Ga11G2616

PIF1

Transcription factor PIF1

-0.96720

2.04E-05

5.35

3.75

0.53

-

-

-

-3.01

down

2.72E-13

-2.75

down

3.95E-10

Ga08G1465

BHLH14

Transcription factor bHLH14

-0.95502

6.08E-05

5.32

3.34

0.23

-

-

-

-4.22

down

9.32E-13

-3.81

down

1.74E-09

Ga08G1561

MYB17

Transcription factor MYB41

-0.93133

2.61E-04

6.69

7.11

0.79

-

-

-

-2.71

down

2.48E-07

-3.10

down

1.15E-09

Ga02G0399

ATHB-6

Homeobox-leucine zipper protein ATHB-6

-0.90599

7.64E-04

17.67

8.53

0.78

-

-

-

-4.16

down

1.05E-23

-3.40

down

4.09E-13

Ga11G0358

MYB39

Transcription factor MYB39

0.90968

6.67E-04

0.19

0.17

1.61

-

-

-

3.50

up

0.000676

3.31

up

0.002633

Ga09G0303

E2FF

E2F transcription factor-like E2FF

0.91693

5.01E-04

4.27

17.38

29.63

2.34

up

6.36E-25

-

-

-

-

-

-

Ga14G2393

HSF24

Heat shock factor protein HSF24

0.92146

4.14E-04

509.37

728.18

949.20

-

-

-

-

-

-

-

-

-

Ga11G1413

MYB5

Transcription repressor MYB5

0.92406

3.69E-04

15.37

13.18

29.76

-

-

-

-

-

-

1.25

up

1.58E-12

Ga05G3057

MYB33

Transcription factor MYB33

0.92628

3.33E-04

8.53

9.82

13.66

-

-

-

1.04

up

2.38E-10

-

-

-

Ga08G2734

MYB63

Transcription factor MYB63

0.93443

2.23E-04

4.00

7.74

12.92

1.29

up

0.000106

2.07

up

6.38E-14

-

-

-

Ga11G1771

RAX3

Transcription factor RAX3

0.94881

9.50E-05

3.79

15.95

32.23

2.40

up

2.12E-23

-

-

-

1.10

up

1.6E-14

Ga05G2779

ABF2

ABSCISIC ACID-INSENSITIVE 5-like protein 5

0.95372

6.71E-05

4.48

6.43

11.08

-

-

-

1.67

up

2.6E-12

-

-

-

Ga09G2273

MYC2

Transcription factor MYC2

0.95869

4.53E-05

10.95

14.05

20.05

-

-

-

-

-

-

-

-

-

Ga03G1640

MYB4

Transcription repressor MYB4

0.96289

3.13E-05

291.38

274.64

452.63

-

-

-

-

-

-

-

-

-

Ga03G1491

HDG2

Homeobox-leucine zipper protein HDG2

0.96443

2.70E-05

29.41

30.06

48.73

-

-

-

-

-

-

-

-

-

Ga01G0896

ERF7

Ethylene-responsive transcription factor 7

0.96582

2.35E-05

105.30

101.73

162.03

-

-

-

-

-

-

-

-

-

Ga14G1718

CMB1

MADS-box protein CMB1

0.96680

2.12E-05

44.14

55.66

76.80

-

-

-

-

-

-

-

-

-

Ga01G1528

HAT14

Homeobox-leucine zipper protein HAT14

0.96717

2.04E-05

0.19

0.28

2.79

-

-

-

4.20

up

5.33E-06

3.41

up

5.02E-05

Ga08G1952

ERF1A

Ethylene-responsive transcription factor 1A

0.96953

1.58E-05

6.05

14.24

28.65

1.59

up

1.26E-08

-

-

-

1.07

up

1.39E-08

Ga14G2108

HSF24

Heat shock factor protein HSF24

0.97291

1.05E-05

190.34

195.66

313.83

-

-

-

-

-

-

-

-

-

Ga10G0817

TGAL1

Transcription factor TGAL1

0.97337

9.88E-06

97.66

90.90

168.75

-

-

-

-

-

-

-

-

-

Ga14G0558

AGL31

Agamous-like MADS-box protein AGL31

0.97482

8.14E-06

0.33

0.57

2.44

-

-

-

3.30

up

0.006616

-

-

-

Ga02G1393

HAT14

Homeobox-leucine zipper protein HAT14

0.98122

2.94E-06

0.05

1.80

12.26

5.19

up

0.000518

7.98

up

2.24E-10

2.84

up

5.25E-14

Ga11G2827

NFYB5

Nuclear transcription factor Y subunit B-5

0.98274

2.19E-06

21.24

32.69

91.42

1.10

up

4.77E-05

-

-

-

1.46

up

1.31E-16

Ga07G2567

MYB305

Myb-related protein 305

0.98479

1.41E-06

461.07

467.90

704.68

-

-

-

-

-

-

-

-

-

Ga12G1199

MYB16

Transcription factor MYB16

0.98595

1.07E-06

0.00

0.69

3.23

-

-

-

7.46

up

1.46E-08

2.30

up

8.97E-05

Ga11G3009

ATHB-7

Homeobox-leucine zipper protein ATHB-7

0.99054

2.69E-07

281.90

314.24

557.30

-

-

-

-

-

-

-

-

-

Ga11G1888

MYB44

Transcription factor MYB44

0.99284

1.02E-07

496.02

515.03

857.18

-

-

-

-

-

-

-

-

-

Ga06G0229

MYB44

Transcription factor MYB44

0.99436

4.42E-08

147.44

171.35

299.22

-

-

-

-

-

-

-

-

-

Ga02G0929

MYB4

Transcription repressor MYB4

0.99587

1.48E-08

35.66

43.98

87.06

-

-

-

-

-

-

1.04

up

5.78E-22

Ga09G1898

MYB308

Myb-related protein 308

0.99615

1.16E-08

32.26

71.78

415.38

1.59

up

2.03E-21

-

-

-

2.53

up

2.1E-196

Ga12G1275

HDG2

Homeobox-leucine zipper protein HDG2

0.99763

2.13E-09

73.08

103.97

224.75

-

-

-

-

-

-

1.22

up

3.4E-235

Ga09G0340

MYB305

Myb-related protein 305

0.99880

1.95E-10

71.57

105.21

281.00

-

-

-

-

-

-

1.45

up

2.64E-77