Table 2 Cytokinin, auxin, and organogenesis-related genes upregulated in apical region of internodal segments

TRINITY_DN12309_c0_g1_i2.p1

3.5

9.3E-09

2.2

1.6E-03

adenylate isopentenyltransferase 3, chloroplastic

IPT3

TRINITY_DN11300_c0_g1_i1.p1

4.6

5.6E-28

5.3

1.7E-27

cytokinin riboside 5′-monophosphate phosphoribohydrolase LOG7

LOG7

TRINITY_DN17801_c3_g3_i4.p1

1.1

7.5E-06

1.3

2.9E-05

histidine-containing phosphotransfer protein 1-like

AHP1

TRINITY_DN19500_c0_g1_i1.p1

1.5

3.7E-09

2.0

2.2E-10

adenine phosphoribosyltransferase 1-like

APT1

TRINITY_DN14544_c0_g1_i5.p3

3.4

6.7E-20

1.2

1.2E-04

adenine phosphoribosyltransferase 5-like

APT5

TRINITY_DN16686_c0_g2_i2.p1

4.2

8.3E-35

3.4

2.1E-24

cytokinin dehydrogenase 6-like

CKX6

TRINITY_DN12412_c0_g1_i1.p1

3.4

6.0E-34

3.8

2.9E-32

indole-3-acetic acid-amido synthetase GH3.6-like

GH3.6

TRINITY_DN17258_c0_g1_i1.p1

2.6

1.9E-66

1.5

3.5E-14

auxin response factor 5

ARF5

TRINITY_DN16500_c2_g2_i2.p1

8.4

8.7E-19

8.3

1.9E-17

AP2-like ethylene-responsive transcription factor PLT2

PLT2

TRINITY_DN8909_c0_g1_i1.p1

7.3

1.8E-10

3.7

2.0E-06

protein CUP-SHAPED COTYLEDON 2-like

CUC2

TRINITY_DN18727_c1_g1_i2.p1

3.2

2.3E-05

3.3

1.6E-04

ethylene-responsive transcription factor ESR2-like

ESR2

TRINITY_DN19423_c2_g6_i1.p1

1.6

2.6E-10

1.8

1.6E-09

dof zinc finger protein DOF3.4-like

DOF3.4

TRINITY_DN12019_c0_g1_i1.p1

1.4

1.4E-08

1.1

1.7E-04

CYCLIN-D3–1-like

CYCD3;1

TRINITY_DN17398_c0_g7_i1.p1

6.5

4.6E-112

7.3

2.4E-96

cytochrome P450 78A5-like

CYP78A5

TRINITY_DN12516_c0_g1_i1.p1

2.0

2.2E-04

3.5

2.2E-07

cytochrome P450 711A1

CYP711A

TRINITY_DN21545_c1_g3_i3.p1

7.1

9.0E-51

6.1

1.8E-40

LOB domain-containing protein 18

LBD18

TRINITY_DN20611_c3_g4_i1.p1

2.5

2.2E-39

1.2

3.6E-07

LOB domain-containing protein 21-like

LBD21

TRINITY_DN17808_c9_g1_i1.p1

9.2

7.4E-87

2.9

3.2E-21

LOB domain-containing protein 25

LBD25