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Table 1 RNA-Seq paired-read counts for all samples used for de novo assembly

From: Gene expression profiling before and after internode culture for adventitious shoot formation in ipecac

sample name read counts mapped paired-read (%) mapped paired-read (ORFa) (%)
leaf-1 7,638,583 98.9 65.9
leaf-2 6,666,534 98.8 65.2
root-1 8,239,930 99.0 67.2
root-2 6,675,989 98.9 67.8
0a-1 8,245,866 99.0 67.3
0a-2 6,816,171 99.0 65.8
0a-3 7,092,896 99.1 66.9
0b-1 7,597,324 98.9 66.5
0b-2 7,038,414 99.0 67.7
0b-3 6,752,651 99.0 67.2
1a-1 7,160,555 98.9 66.5
1a-2 6,522,547 99.0 67.0
1a-3 5,658,138 99.0 67.4
1b-1 7,993,239 99.0 68.4
1b-2 6,991,590 99.0 68.3
1b-3 6,333,466 99.0 68.8
total 113,423,893   
  1. aORF open reading frame