Transcript ID | RNA targets | Homologs in A. thaliana | PPR subfamily (class) | E-value | Identity (%) | RNA targets | References |
---|---|---|---|---|---|---|---|
AaPPR1 | ycf1 | AT4G35130 | PLS (DYW) | 0 | 51 | – | – |
AaPPR2 | rpoC1, rps12 | AT2G29760 (OTP81/QED1) | PLS (DYW) | 0 | 55 | ï½¥Editing of accD, matK, ndnB, rpoB and rps12. | [56] |
AaPPR5 | trnK-UUU | AT4G18520 (SEL1/PDM1) | PLS (PLS) | 0 | 54 | ï½¥Processing of rpoA. ï½¥Editing of accD. ï½¥Splicing of ndhA and trnK. | |
AaPPR6 | rps16, petN, atpE | AT4G16390 (SVR7) | P (SMR) | 0 | 63 | ï½¥Transcription of ATP synthase subunits (atpB/E, atpH and atpF) and psaJ. ï½¥Accumulation of ATP synthase subunits (atpA, atpB, atpE and atpF). ï½¥Translation rbcL and atpB/E. | [60] |
AaPPR10 | rpoC1, psbC, petA, rrn23 | GRMZM2G025409 (ZmPPR5) | P | 0 | 70 | ï½¥Stabilizing unspliced precursor of trnG-UCC by inhibiting an endonucleolytic cleveage event. ï½¥Possible association with rpl16. ï½¥Indirect association with reduction in rRNA processing. | [61] |
AaPPR11 | ycf2 | AT4G30825 (BFA2) | P | 0 | 60 | ï½¥Barrier to prevent the atpH/F transcript degradation by exoribonucleases by binding to the consensus of the atpF/A intergenic region | [62] |
AaPPR13 | atpA, rps14, trnI-GAU, ycf1 | AT5G13770 | P | 0 | 50 | – | – |
AaPPR15 | rbcL, rpl33 | AT2G02980 (OTP85) | PLS (DYW) | 0 | 57 | ï½¥Editing of ndhD | [63] |
AaPPR18 | ycf2, psbD, psbC, psaB, ndhG | AT4G02750 | PLS (DYW) | 1.00E-117 | 45 | – | – |