Assembly feature | R. molle | R. delavayi | R. williamsianum | R. simsii |
---|---|---|---|---|
Estimate of genome size (Mb) | 700.18 | * | 525 | * |
Assembly genome length (Mb) | 744.36 | 695.1 | 532.1 | 528.6 |
Repeat region in genome (Mb) | 472 | 356 | * | 251 |
Contigs number | 3581 | * | * | 911 |
Contigs N50 (kb) | 836.61 | 61 | * | 2234 |
Longest Contigs (kb) | 5461 | 581.4 | * | * |
GC content | 41.15% | * | * | 38.91% |
Number of chromosomes | 13 | * | 13 | 13 |
Length anchor on chromosomes (Mb) | 703 | * | 368.4 | 481.9 |
Oriented percentage | 88.2% | * | * | * |
Scaffolds number | 2537 | 193,091 | 11,985 | 552 |
Scaffolds N50 (Mb) | 47.02 | 0.64 | 0.22 | 36.3 |
Scaffold max (Mb) | 66.75 | * | * | * |
Genome Annotation | ||||
 Predicted gene models | 39,288 | * | * | 34,170 |
 Gene density/Mb | 53 | * | * | * |
 Average gene length (bp) | 4752.73 | 4434.22 | 4628 | 5089.22 |
 Average coding sequence length (bp) | 1213.78 | 1153.21 | * | 1288.73 |
 Non coding RNAs | 2628 | * | * | 1171 |
 Pseudogenes | 6180 | * | * | * |