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Table 1 Basic characteristics of Citrus sinensis TCP genes

From: Genome-wide analysis of citrus TCP transcription factors and their responses to abiotic stresses

Gene name Gene ID Chromosome location Strand Length of CDS (bp) Number of amino acids Molecular weight (Da) Theoretical pI Signal peptide length (aa) Predicted subcellular localization
CsTCP1 Cs2g08080.1 chr2: 4848829..4853255 1515 504 55,291.28 7.16 Nuclear
CsTCP2 Cs2g15820.1 chr2: 12548474..12550882 + 1005 334 36,343.85 6.53 Nuclear
CsTCP3 Cs2g25640.1 chr2: 24866364..24868750 + 954 317 33,912.73 9.01 Nuclear
CsTCP4 Cs3g22260.1 chr3: 24926039..24927594 963 320 33,181.31 7.79 Nuclear
CsTCP5 Cs5g03980.1 chr5: 2195508..2197485 + 1281 426 46,428.83 7.10 Nuclear
CsTCP6 Cs5g10130.1 chr5: 6994168..6996231 1107 368 39,316.14 6.72 Nuclear
CsTCP7 Cs5g12070.1 chr5: 9052963..9054997 + 1098 365 40,856.09 6.74 Nuclear
CsTCP8 Cs6g18940.1 chr6: 18950739..18952107 + 897 298 34,061.36 9.38 Nuclear
CsTCP9 Cs6g22270.1 chr6: 21078708..21080763 + 1203 400 43,616.64 8.88 Nuclear
CsTCP10 Cs7g03980.1 chr7: 1887520..1889541 + 1185 394 42,105.60 7.78 Nuclear
CsTCP11 Cs7g11120.1 chr7: 7320850..7323133 + 825 274 29,286.77 9.44 Nuclear
CsTCP12 Cs7g12770.1 chr7: 8725990..8727399 1410 469 52,553.18 6.62 Nuclear
CsTCP13 Cs7g25460.1 chr7: 25950030..25952883 + 1281 426 46,861.16 6.78 Nuclear
CsTCP14 Cs7g26250.1 chr7: 26808458..26809706 1095 364 41,735.96 6.29 Nuclear
CsTCP15 Cs8g16060.1 chr8: 19154530..19155054 + 525 174 19,507.20 9.03 Nuclear
CsTCP16 Cs8g16080.1 chr8: 19169920..19171017 + 675 224 24,176.45 4.44 Nuclear
CsTCP17 Cs9g12640.1 chr9: 11059738..11061409 + 957 318 36,575.30 9.47 Nuclear
CsTCP18 Cs9g16600.1 chr9: 16080000..16081746 1017 338 35,966.34 8.84 Nuclear
CsTCP19 orange1.1 t02428.1 chrUn: 36970387..36971007 + 621 206 21,666.35 7.00 Nuclear
CsTCP20 orange1.1 t03896.1 chrUn: 59999964..60002615 + 1734 577 61,307.81 6.70 Nuclear
  1. aa amino acid(s), CDS Coding sequence(s), Da Dalton(s), pI Isoelectric point