Sample | Sample codes | Total raw reads | Total clean reads | Q30 percentage | GC percentage | Mapped reads |
---|---|---|---|---|---|---|
R-CK-1d | A1 | 55,748,520 | 54,902,578 | 90.89% | 44.68% | 48,461,126 (88.27%) |
A2 | 45,180,146 | 44,519,734 | 90.79% | 44.67% | 39,218,588 (88.09%) | |
A3 | 56,566,114 | 55,926,244 | 91.78% | 44.68% | 49,444,924 (88.41%) | |
G-CK-1d | B1 | 44,381,646 | 43,750,294 | 92.05% | 44.45% | 39,676,319 (90.69%) |
B2 | 52,844,132 | 52,205,426 | 91.42% | 44.45% | 47,188,315 (90.39%) | |
B3 | 52,031,904 | 51,009,182 | 91.94% | 44.42% | 46,167,529 (90.51%) | |
R-NAA-1d | C1 | 57,542,312 | 56,686,212 | 91.89% | 44.59% | 51,029,371 (90.02%) |
C2 | 55,347,558 | 54,541,818 | 91.59% | 44.45% | 48,816,430 (89.5%) | |
C3 | 51,652,776 | 51,038,136 | 91.47% | 44.55% | 45,737,006 (89.61%) | |
G-NAA-1d | D1 | 52,700,594 | 52,057,588 | 90.97% | 44.23% | 46,509,280 (89.34%) |
D2 | 55,390,048 | 54,436,326 | 90.91% | 44.31% | 48,726,670 (89.51%) | |
D3 | 56,837,616 | 55,965,548 | 91.10% | 44.25% | 50,099,962 (89.52%) | |
R-CK-8d | E1 | 46,872,348 | 46,240,196 | 92.72% | 44.68% | 41,131,620 (88.95%) |
E2 | 49,103,480 | 48,415,422 | 91.14% | 44.67% | 42,851,995 (88.51%) | |
E3 | 50,104,932 | 49,475,110 | 91.93% | 44.70% | 44,022,857 (88.98%) | |
G-CK-8d | F1 | 63,410,740 | 62,124,940 | 90.87% | 44.42% | 55,965,379 (90.09%) |
F2 | 50,629,854 | 49,770,586 | 90.94% | 44.59% | 45,090,269 (90.6%) | |
F3 | 54,849,538 | 53,952,010 | 91.47% | 44.34% | 48,785,963 (90.42%) | |
R-NAA-8d | G1 | 67,137,970 | 66,312,940 | 90.96% | 44.62% | 59,403,835 (89.58%) |
G2 | 53,263,604 | 52,548,220 | 89.24% | 44.64% | 46,583,734 (88.65%) | |
G3 | 63,705,624 | 62,386,776 | 91.73% | 44.61% | 55,864,525 (89.55%) | |
G-NAA-8d | H1 | 55,555,552 | 54,971,598 | 91.33% | 44.68% | 49,699,991 (90.41%) |
H2 | 40,449,238 | 39,861,204 | 86.19% | 44.33% | 34,024,657 (85.36%) | |
H3 | 48,181,458 | 47,547,582 | 88.58% | 44.38% | 41,066,507 (86.37%) | |
R-CK-15d | I1 | 47,395,304 | 46,844,706 | 90.23% | 44.46% | 41,872,539 (89.39%) |
I2 | 54,717,128 | 54,094,692 | 90.30% | 44.48% | 48,221,365 (89.14%) | |
I3 | 60,353,348 | 59,666,972 | 89.08% | 44.48% | 52,824,484 (88.53%) | |
G-CK-15d | J1 | 41,621,104 | 41,221,466 | 91.20% | 44.49% | 37,187,978 (90.22%) |
J2 | 54,133,590 | 53,526,422 | 91.27% | 44.73% | 48,540,696 (90.69%) | |
J3 | 60,629,848 | 59,836,052 | 90.28% | 44.42% | 53,573,924 (89.53%) | |
R-NAA-15d | K1 | 46,668,718 | 45,880,264 | 92.31% | 44.63% | 41,307,179 (90.03%) |
K2 | 68,372,780 | 66,772,728 | 92.20% | 44.56% | 60,021,696 (89.89%) | |
K3 | 55,461,778 | 54,518,126 | 92.59% | 44.67% | 49,094,849 (90.05%) | |
G-NAA-15d | L1 | 47,265,242 | 46,458,626 | 92.44% | 44.69% | 41,911,565 (90.21%) |
L2 | 48,935,976 | 48,099,790 | 91.55% | 44.62% | 43,335,448 (90.09%) | |
L3 | 48,331,024 | 47,521,016 | 92.14% | 44.73% | 43,008,727 (90.5%) |