Table 2 Quality control results of RNA-seq sequencing
Sample name | Clean reads | Mapped reads | Unique reads | Overall alignment rate (%) |
|---|---|---|---|---|
Zheng58×lx9801hlEW2b-1 | 52696924 | 41081662 | 15228972 | 77.96 |
Zheng58×lx9801hlEW2b-2 | 50729427 | 37786413 | 13355029 | 74.49 |
Zheng58×lx9801hlEW2b-3 | 46591671 | 33340291 | 22116933 | 71.56 |
Zheng58×lx9801-1 | 40571709 | 29508794 | 20490525 | 72.73 |
Zheng58×lx9801-2 | 43573400 | 33108175 | 19836565 | 75.98 |
Zheng58×lx9801-3 | 55896954 | 42325450 | 28002298 | 75.72 |
lx9801hlEW2b-1 | 26511075 | 18086226 | 13867086 | 68.22 |
lx9801hlEW2b-2 | 24226497 | 16831450 | 12929446 | 69.48 |
lx9801hlEW2b-3 | 23455267 | 15918412 | 12238590 | 67.87 |
lx9801-1 | 23454232 | 15906876 | 12133384 | 67.82 |
lx9801-2 | 23904060 | 16110550 | 12256263 | 67.4 |
lx9801-3 | 20571135 | 13774186 | 10530690 | 66.96 |
Zheng 58-1 | 25073927 | 18793335 | 15345069 | 74.95 |
Zheng 58-2 | 28394765 | 19640847 | 14589745 | 69.17 |
Zheng 58-3 | 34151444 | 23091536.5 | 16754092 | 67.62 |