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Fig. 5. | BMC Plant Biology

Fig. 5.

From: In-vitro and in-silico antibacterial activity of Azadirachta indica (Neem), methanolic extract, and identification of Beta.d-Mannofuranoside as a promising antibacterial agent

Fig. 5.

2D interaction of.beta.d-Mannofuranoside, O-geranyl (colored black in the center), and the proteins binding sites residues, showing the percentage of H-bonds (violet) during 50 ns of MD simulation time. Active site residues are colored red (negatively charged), deep blue (positively charged), green (hydrophobic), pale yellow (glycin), pale blue (polar), and water molecules (gray). A. tyrosyl-tRNA synthetase (PDB ID: 1JIJ) B. DNA gyrase (PDB ID: 3TTZ) C. Penicillin-Binding Protein 2X (PBP2X) (PDB ID: 5OJ0), and D. Penicillin-binding protein 4 (PBP4) (PDB ID: 1TVF)

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BMC Plant Biology

ISSN: 1471-2229

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