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Table 2 The sequencing statistics for 6 RNA libraries of C. longepaniculatum

From: Transcriptome and metabolome reveal the accumulation of secondary metabolites in different varieties of Cinnamomum longepaniculatum

Sample

CLH_1

CLH_2

CLH_3

CLL_1

CLL_2

CLL_3

Raw reads

44,061,552

50,122,094

51,718,942

49,379,184

45,048,422

45,636,610

Raw bases

6,653,294,352

7,568,436,194

7,809,560,242

7,456,256,784

6,802,311,722

6,891,128,110

Clean reads

43,776,584

49,761,596

51,338,780

48,950,688

44,744,566

45,296,960

Clean bases

6,433,300,702

7,335,310,435

7,561,568,161

7,229,138,023

6,594,257,446

6,650,661,594

Q30 (%)

93.44

92.97

93.21

93.18

93.65

93.36

GC content (%)

45.64

45.54

45.58

46.13

45.47

45.63

Mapped reads

34,075,222

39,118,058

40,296,402

38,020,826

34,865,230

34,879,358

Mapped ratio(%)

77.84

78.61

78.49

77.67

77.92

77.00