Skip to main content

Table 6 DDEGs in different structures annotated as “DNA-binding transcription factor activity” (GO:0003700)

From: Comparative transcriptomics identifies candidate genes involved in the evolutionary transition from dehiscent to indehiscent fruits in Lepidium (Brassicaceae)

 

Ortholog ID

Ortholog name

Ortholog description (based on TAIR)

Reg

flower vs. bud

AT3G15540.1

IAA19, MSG2

Stamen filaments development

4,8

AT5G47230.1

AtMACD1, ERF102, ERF5

Stress response, leaf growth

5,3

fruit vs. flower

AT2G20180.2

PIF1, PIL5

Phytochrome-mediated seed germination

2,7

AT3G01530.1

ATMYB57, MYB57

Stamen and nectary development

-2,9

AT3G15030.1

MEE35, TCP4

Cotyledon, leaf and petal development, seed oil accumulation

-4,3

AT3G18550.1

BRC1, TCP18

Arrests axillary bud development and prevents axillary bud outgrowth. Role in flowering control

-4,3

AT5G52660.2

RVE6

Involved in circadian rhythm

-2,6

AT5G53200.1

TRY

Trichome and root hair patterning, phosphate starvation response

-6,0

AT5G60850.1

DOF5.4, OBP4

Cell Cycle Progression and Cell Expansion

-2,3