Table 5 DEGs between the two Lepidium species annotated as “DNA-binding transcription factor activity”. (GO:0003700). Reg., regulation
Ortholog ID | Ortholog name | Ortholog description (based on TAIR) | Reg. bud | Reg. flower | Reg. fruit |
|---|---|---|---|---|---|
AT1G01060.1 | LHY | Involved in circadian rhythm | 2.5 | 2.4 | 2.8 |
AT1G14687.1 | HB32, ZHD14 | n.a | -4.0 | -3.1 | -2.2 |
AT1G27370.1 | SPL10 | Development of lateral organs, lamina shape, lateral root growth | -3.9 | -3.8 | -4.6 |
AT1G46264.1 | HSFB4, SCZ | Asymmetry of stem cell devisions | -5.3 | -4.4 | -4.1 |
AT1G53160.2 | FTM6, SPL4 | Regulation of flowering and vegetative phase change | -5.2 | -5.3 | -4.5 |
AT1G79840.2 | GL2 | Regulation of epidermal cell identity, regulation of seed oil content | 3.5 | 3.6 | 2.7 |
AT3G09370.2 | MYB3R-3 | DNA damage response | -2.4 | -2.2 | -2.6 |
AT3G11280.1 | n.a | n.a | -2.6 | -2.9 | -2.9 |
AT3G14020.1 | NF-YA6 | Involved in male gametogenesis, embryogenesis, and seed development | -2.6 | -2.2 | -2.4 |
AT3G53340.1 | NF-YB10 | Flowering time determination | 3.3 | 3.4 | 4.9 |
AT4G00180.1 | YAB3 | Specification of abaxial cell fate, involved in fruit patterning along with FIL | -2.6 | -2.5 | -2.5 |
AT4G01280.2 | RVE5 | Clock regulation, growth regulation | 2.6 | 2.2 | 2.2 |
AT4G31060.1 | n.a | n.a | -2.9 | -3.5 | -3.4 |
AT5G04340.1 | C2H2, CZF2, ZAT6 | Phosphate homeostasis, Cd accumulation and tolerance | 4.0 | 4.6 | 3.4 |
AT5G10140.1 | AGL25, FLC, FLF, RSB6 | Flowering time determination | 3.7 | 4.1 | 5.6 |
AT5G39760.1 | HB23, ZHD10 | Light-induced development | 7.2 | 6.3 | 4.9 |
AT5G41920.1 | SCL23 | Endodermis development | -5.0 | -5.3 | -3.9 |
AT5G47640.1 | NF-YB2 | Flowering time determination | 2.2 | 2.6 | 2.4 |
AT5G60910.1 | AGL8, FUL | Fruit development, apical hook development | -2.9 | -2.4 | -2.7 |