Table 3 Gene ontology (GO) terms significantly over- or underrepresented in DEGs and DDEGs. Terms of the category molecular function of GO were analysed. FDR, false discovery rate
Dataset | GO term | Fold enrichment | FDR |
|---|---|---|---|
La vs. Lc bud | protein binding (GO:0005515) | 0.74 | 3.43E-02 |
| Â | transferase activity, transferring phosphorus-containing groups (GO:0016772) | 0.44 | 2.84E-02 |
La vs. Lc flower | none | Â | Â |
La vs. Lc fruit | none | Â | Â |
Lc flower vs. bud | pectinesterase activity (GO:0030599) | 10.69 | 1.48E-02 |
| Â | RNA binding (GO:0003723) | 0.15 | 8.99E-03 |
La flower vs. bud | sodium:proton antiporter activity (GO:0015385) | 14.17 | 2.35E-04 |
| Â | cellulose synthase (UDP-forming) activity (GO:0016760) | 10.52 | 3.18E-02 |
| Â | polygalacturonase activity (GO:0004650) | 8.13 | 8.50E-03 |
| Â | iron ion binding (GO:0005506) | 3.12 | 3.48E-02 |
| Â | oxidoreductase activity acting on paired donors with incorporation or reduction of molecular oxygen (GO:0,016,705) | 2.89 | 4.07E-02 |
| Â | protein binding (GO:0005515) | 0.71 | 3.99E-02 |
| Â | RNA binding (GO:0003723) | 0.17 | 1.30E-03 |
Lc fruit vs. flower | heme binding (GO:0020037) | 5.11 | 9.54E-04 |
| Â | hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553) | 4.28 | 1.15E-03 |
La fruit vs. flower | none | Â | Â |
flower vs. bud | acid-amino acid ligase activity (GO:0016881) | 40.35 | 1.53E-02 |
fruit vs. flower | none | Â | Â |