Table 4 ANOVA for individuals harboring the superior and inferior alleles for the stable significant SNPs in multi-environments
SNP_id | Chr. | Allele type | Phenotype value(BLUP) | Allele number | Allele percentage(%) | p-Value | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Superior | Inferior | Superior | Inferior | Superior | Inferior | Superior | Inferior | Ca_YY | Ca_SQ | Ca_KF | Ca_BLUP | ||
AX-110013515 | 3B | AG | AA | 333.79 | 330.13 | 33 | 169 | 16.34 | 83.66 | 1.31E-06 | 5.35E-01 | 1.82E-01 | 2.97E-04 |
AX-110922471 | 3B | GG | AA | 333.37 | 329.18 | 86 | 54 | 61.43 | 38.57 | 5.04E-06 | 6.91E-01 | 8.85E-04 | 2.52E-05 |
AX-94729264 | 3D | CC | CT | 332.52 | 328.75 | 113 | 94 | 54.59 | 45.41 | 2.35E-07 | 1.22E-06 | 6.46E-04 | 2.34E-07 |
AX-108912427 | 4A | GG | AG | 332.64 | 328.74 | 111 | 94 | 54.15 | 45.85 | 7.41E-21 | 3.73E-06 | 7.04E-04 | 9.08E-08 |