De novo assembly of a fruit transcriptome set identifies AmMYB10 as a key regulator of anthocyanin biosynthesis in Aronia melanocarpa

Table 1 Summary of sequence assembly after sequencing

Sample	Raw seqs	Trimmed seqs	Transcripts	GC %	N50 (bp)	Avg. contig
UC007-0	16,266,511	12,918,578	94,932	43.52	1503	1132.5
UC007-1	20,523,368	16,885,640	107,934	43.30	1715	1251.0
UC007-2	20,677,209	17,257,834	99,253	43.36	1683	1248.0
UC007-3	19,680,123	16,357,270	106,317	43.12	1747	1283.9
UC009-0	17,402,118	14,115,131	98,447	43.20	1734	1284.3
UC009-1	19,044,510	16,612,439	101,483	43.24	1754	1291.3
UC009-2	20,715,687	17,388,235	95,429	43.03	1934	1402.1
UC009-3	20,401,858	17,180,983	97,785	43.28	1761	1047.0
UC029-0	11,552,880	8,497,642	72,564	43.61	1571	1186.4
UC029-1	17,455,593	14,315,974	96,771	43.43	1660	1237.5
UC029-2	17,942,511	14,117,604	81,263	43.80	1630	1226.7
UC029-3	19,572,025	15,929,256	91,572	43.35	1758	1297.1
UC030-0	18,533,052	14,583,810	92,921	43.51	1644	1232.0
UC030-1	15,903,498	11,840,627	86,082	43.57	1633	1221.3
UC030-2	17,798,527	14,172,948	83,011	43.52	1713	1278.1
UC030-3	17,339,014	13,199,343	88,523	43.38	1685	1251.4
UC074-0	14,187,995	11,012,747	85,411	43.68	1624	1206.4
UC074-1	18,222,991	14,154,735	94,404	43.36	1714	1276.3
UC074-2	17,690,591	13,470,011	88,069	43.40	1786	1321.9
UC074-3	20,181,509	16,249,193	103,761	43.33	1676	1242.1
UC087-0	19,237,584	14,871,087	94,593	43.42	1774	1317.1
UC087-1	17,552,575	12,980,271	85,066	43.65	1685	1262.2
UC087-2	15,193,808	10,912,624	83,592	43.57	1705	1271.5
UC087-3	15,923,162	12,724,151	81,278	43.71	1602	1201.4
Average	17,874,946	14,239,506	92,103	43.43	1695	1249

ISSN: 1471-2229