The genetic control of polyacetylenes involved in bitterness of carrots (Daucus carota L.): Identification of QTLs and candidate genes from the plant fatty acid metabolism

Table 2 List of Daucus carota CER1 and CER3 gene models sorted by their physical position on the assembled nine carrot chromosomes according to the whole genome sequence [34]

		Genomic coordinates^a				Optimized	Predicted	CDS	No. of	Protein
Chromosome^a	Gene Name	Strand	Start	Stop	Locus name^a	prediction	function	length	introns	length
3	DcCER3–6	for	12,173,825	12,178,868	DCAR_009898	no	CER3	1899	10	633
4	DcCER1–4	rev	8,094,127	8,099,851	DCAR_015766	yes	CER1	1884	8	628
4	DcCER3–5	for	19,421,348	19,424,982	DCAR_014721	yes	CER3	1905	9	635
5	DcCER3–3	for	2,179,381	2,183,098	DCAR_016321	yes	CER3	1914	9	638
5	DcCER3–4	for	25,089,512	25,093,379	DCAR_017940	yes	CER3	1902	10	634
6	DcCER3–1	rev	nd	23,574,832	DCAR_021381	yes	CER3	1713	nd	571
6	DcCER3–2	rev	23,591,227	23,597,355	DCAR_021379	yes	CER3	1908	10	636
7	DcCER1–3	rev	22,041,265	22,045,133	XP_017216154.1		CER1	1863	nd	621
7	DcCER1–5	for	22,046,109	22,048,531	DCAR_025018	yes	CER1	1848	nd	616
9	DcCER1–2	rev	5,028,865	5,034,295	DCAR_029345	no	CER1	1881	9	627
9	DcCER1–1	rev	5,038,893	5,042,667	DCAR_029346	no	CER1	1719	7	573
9	DcCER1–6	rev	8,516,093	8,518,841	DCAR_029533	no	CER1	1845	6	615

^a Chromosomes, genomic coordinates, and locus names according the carrot whole genome sequence assembly vers.2 [34]; nd not determined

ISSN: 1471-2229