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Table 1 QTLs for FaOH and FaDOH concentrations measured in roots of carrot F2 progeny CA and parameters of 2-LOD confidence intervals

From: The genetic control of polyacetylenes involved in bitterness of carrots (Daucus carota L.): Identification of QTLs and candidate genes from the plant fatty acid metabolism

     

Genetic 2-LOD interval (cM)

Physical 2-LOD interval (Mbp)

Markers 2-LOD interval

QTL effect (mean)a

Substance

QTL

Chrom.

LOD

% Var.

Start

Peak

Stop

Start

Peak

Stop

Start

Peak

Stop

AA

AB

BB

FaOH

FaOH_1.1

1

4,34

5,57

4,8

22,4

53,6

824,774

540,6415

47,969,302

K0514

K4057

K1504

4,79

5,03

5,43

FaOH

FaOH_3.1

3

8,99

9,93

41,2

42,8

57,5

43,925,869

45,134,655

49,341,067

K1064

K1792

K0474

4,63

5,12

5,28

FaOH

FaOH_4.1

4

14,48

8,41

32,9

40,4

47,8

13,388,045

20.392970

33,347,895

K3873

K3654

K1382

4,70

5,21

5,76

FaOH

FaOH_5.1

5

3,64

6,88

17,8

33,3

53,6

524,0197

22,019928

41,938,893

K2562

K1670

mCA4358

4,75

5,11

5,09

FaOH

FaOH_8.1

8

3,89

6,18

8,9

21,5

51,2

200,9986

521,4614

31,631,123

K2093

K1762

K1770

4,90

4,92

5,34

FaOH

FaOH_9.1

9

16,71

15,35

13,0

16,1

21,8

434,2239

637,6534

11,832,494

K0850

K3482

K3568

4,50

5,17

5,59

FaDOH

FaDOH_1.1

1

4,45

7,28

4,8

31,9

53,6

824,774

21,266,018

47,969,302

K0514

K4090

K1504

6,72

6,78

7,29

FaDOH

FaDOH_4.1

4

21,81

8,51

32,9

35,5

48,4

13,388,045

15,954,204

33,764,607

K3873

K1837

K0154

6,54

6,99

7,48

FaDOH

FaDOH_5.1

5

7,06

8,30

35,7

39,4

46,0

25,598,051

33,366,279

39,470,106

K0871

K3010

K1404

6,61

6,83

7,15

FaDOH

FaDOH_9.1

9

40,35

24,55

13,0

16,1

18,9

434,2239

637,6534

849,4898

K0850

K3482

K3359

6,27

6,97

7,49

FaDOH/FaOH

Ratio_3.1

3

17,27

18,29

40,2

42,8

50,7

43,339,133

45,134,655

47,622,391

K0980

K1792

K1640

1,52

1,34

1,28

FaDOH/FaOH

Ratio_8.1

8

5,00

5,11

8,9

21,5

51,2

200,9986

521,4614

31,631,123

K2093

K1762

K1770

1,42

1,40

1,28

  1. aAlleles of QTL effects: A - Parent P_345B; B - Parent P_1870