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Table 3 Marker based narrow sense heritability (h2) for canopy wilting (CW) and carbon isotope ratio (δ 13C) in soybean, and seeds per plant (SPP) and panicles per plant (PPP) in rice, and days to tasseling (DT) and ear height (EH) in maize using 10 sets of markers in different training-to-testing proportions (TPS)

From: Genomic prediction models for traits differing in heritability for soybean, rice, and maize

Traits

TPS (%)

Subsets of markers†

Com

SNP_5

SNP_1

SNP_05

SNP_NS

LD_90

LD_80

LD_70

LD_60

LD_50

Soybean

 CW

90

74

76

77

78

76

75

76

76

75

75

70

59

71

71

75

71

64

68

69

65

65

50

79

79

80

79

79

78

79

79

78

78

 δ13C

90

27

36

38

41

36

27

28

28

28

27

70

38

46

45

48

46

38

39

39

38

37

50

36

43

44

41

43

36

37

37

36

35

Rice

 SPP

90

36

49

51

52

27

34

34

34

33

34

70

25

33

38

38

21

24

24

25

24

24

50

28

42

38

43

23

28

27

27

26

26

 PPP

90

61

78

81

80

57

61

61

61

61

61

70

70

88

88

87

66

71

71

71

71

72

50

77

84

82

77

74

76

76

76

76

76

Maize

 DT

90

80

85

85

83

76

81

81

81

81

81

70

63

69

70

68

60

63

63

64

64

64

50

97

99

99

98

88

98

98

98

98

98

 EH

90

60

74

79

74

52

61

62

62

62

62

70

52

64

63

61

44

52

52

52

53

52

50

70

77

79

71

59

69

70

69

69

69

  1. †Subsets of markers included a complete set (Com), SNP markers significant at P-values of 0.50 (SNP_5), 0.10 (SNP_1), 0.05 (SNP_05) or based upon linkage disequilibrium when the correlation coefficient between markers in a LD block were ≥ 0.90 (LD_90), 0.80 (LD_80), 0.70 (LD_70), 0.60 (LD_60), or 0.50 (LD_50)