Type of contextual evidence | Functionally linked proteins / domains / COGs | Taxa in which these functions are putatively linked | COG functional categories / Most relevant GO terms // Additional comments |
---|---|---|---|
Domain fusions | Glucose-sorbosone dehydrogenase, (Pectate Lyase-like carbohydrate-binding module, FN3-like domain) (COG1881, COG2133) | Actinobacteria, Gammaproteobacteria | Carbohydrate transport and metabolism / Hydrolase activity, acting on glycosyl bonds |
Operons | Dialkylmaleic anhydride synthesis and conjugation module of tautomycin/tautomycetin biosynthesis operon | Actinobacteria | // Five-carbon substrate (a pentose?) |
Phyletic vectors (prokaryotes) | Acyl-CoA synthetase, NDP forming (COG1042). | 220 species | Energy production and conversion / ATP-binding, N-acetyltransferase activity // Nucleoside-containg substrate and product |
Phyletic vectors (prokaryotes) | YbaR/Trm112 activator of RNA and protein methyltransferases; COG2835 | 233 species | Translation, ribosomal structure and genesis // RNA modification |
Phyletic vectors (eukaryotes) | NUDT3 and other NUDIX hydrolases | Mammalia | // Hydrolases preferring pyrophosphate-containing substrates (nucleoside phosphates or phospholipids) |
Shared putative regulatory motifs | RlmA 23S rRNA m(1)G745 methyltransferase (COG2226) | Enterobacteriaceae | Coenzyme transport and metabolism / rRNA base methylation |
Shared putative regulatory motifs | YobB putative carbon-nitrogen hydrolase family protein (COG0388) | Enterobacteriaceae | Energy production and conversion / Nitrogen compound metabolic process |
Shared putative regulatory motifs | AdrB c-di-GMP phosphodiesterase (COG2200) | Enterobacteriaceae | Signal transduction mechanisms / Cellular response to DNA damage stimulus // Nucleoside substrate |
Integrated evidence | RlhA 23S rRNA 5-hydroxycytidine C2501 synthase (COG0826) | n/a | Signal transduction mechanisms / rRNA processing, rRNA modification |