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Table 4 Statistical analysis of haplotype diversity, nucleotide diversity, and neutrality for each group using the aligned sequences of three cpDNA regions

From: Erianthus germplasm collection in Thailand: genetic structure and phylogenetic aspects of tetraploid and hexaploid accessions

Group a

b

Haplotype diversity

Nucleotide diversity

Neutrality tests

Haplotypes c

h

Pi

(10−3)

θ

π

(10− 3)

DFu and Li

FFu and Li

FFu

DTajima

F1

56

H1(20), H2(5), H3(16), H4(5), H5(4), H6(1), H7(5)

0.78

1.36

1.74

0.84

1.29

1.67

1.84

1.68

F2

8

H4(8)

F3

16

H1(8), H7(8)

0.53

0.25

0.30

0.14

0.69

1.03

1.36

1.53

F4

34

H1(21), H5(7), H6(5), H8(1)

0.57

0.86

1.22

0.58

0.23

0.63

2.28

1.26

AM

7

H3(2), H4(4), H7(1)

Overall

121

H1(49), H2(5), H3(18), H4(17), H5(11), H6(6), H7(14), H8(1)

0.78

1.23

1.68

0.81

0.53

0.94

1.83

1.27

  1. a Groups assigned by structure analysis (K = 4). AM, accessions assigned to admixture at the 0.80 cutoff
  2. b Number of accessions in each group
  3. c Number of accessions in each haplotype is shown in parentheses