Characterization of non-specific lipid transfer protein (nsLtp) gene families in the Brassica napus pangenome reveals abundance variation

Table 3 BnLTPs underlying reported QTL for blackleg in the ZS11 assembly

Locus	Resistance	Publication	Pseudomolecule	Start	End	Length	Core genes percentage
Locus	Resistance	Publication	Pseudomolecule	(bp)	(bp)	(bp)	Core genes percentage
Rlm1	blackleg	Delourme et al., 2004	A07	25,515,316	30,891,516	5,376,200	3 core, 2 variable
Rlm1	blackleg	Raman et al., 2012b	A07	25,515,316	30,891,516	5,376,200	(60% core)
Rlm3	blackleg	Delourme et al., 2004	A07	11,368,284	29,211,062	17,842,778	1 core, 3 variable
Rlm3	blackleg	Leflon et al., 2007	A07	11,368,284	29,211,062	17,842,778	(25% core)
Rlm4	blackleg	Raman et al., 2012a	A07	1,512,732	32,016,319	30,503,587	4 core, 4 variable
Rlm4	blackleg	Tang and Zhao, 2015	A07	1,512,732	32,016,319	30,503,587	(50% core)
Rlm7	blackleg	Larkan et al., 2016	A07	15,452,927	23,156,986	7,704,059	0 core, 1 variable
Rlm7	blackleg	Larkan et al., 2016	A07	15,452,927	23,156,986	7,704,059	(0% core)
Rlm9	blackleg	Delourme et al., 2004	A07	17,146,407	22,717,328	5,570,921	0 core, 1 variable (0% core)
LepR1	blackleg	Larkan et al., 2016	A02	10,497,184	23,959,094	13,461,910	1 core, 6 variable (14.29% core)
LepR2	blackleg	Larkan et al., 2016	A10	253,009	20,875,594	20,622,585	3 core, 3 variable
LepR2	blackleg	Larkan et al., 2016	A10	253,009	20,875,594	20,622,585	(50% core)

ISSN: 1471-2229