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Table 1 Differentially expressed and highly transcribed genes related to genes related to photosynthesis and reactive oxygen species scavenging in the different treatment Limonium bicolor leaves

From: Melatonin increases growth and salt tolerance of Limonium bicolor by improving photosynthetic and antioxidant capacity

Gene ID B1 B2 FC B3 B4 FC
ADG1: Encodes the small subunit of ADP-glucose pyrophosphorylase.
Lb0G37377 612.33 732.32 0.26 up 29.54 644.96 4.45 up
DGD2: Encodes a UDP-galactose-dependent digalactosyldiacylglycerol (DGDG) synthase.
Lb1G03486 96.50 1.96 −5.62 down 2.91 82.79 4.83 up
ATSUC4: Low affinity (10 mM) sucrose transporter in sieve elements (phloem).
Lb1G06992 4.05 65.24 4.01 up 4.28 121.09 4.82 up
Lb3G15617 24.60 NS NS 2.46 52.38 4.41 up
Phosphofructokinase family protein.
Lb6G30828 22.58 201.71 3.16 up 20.99 361.12 4.10 up
PNAD-MDH: Encodes a protein with NAD-dependent malate dehydrogenase activity.
Lb1G04420 826.21 843.68 0.03 up 140.65 1082.78 2.94 up
PSBA: Encodes chlorophyll binding protein D1.
Lb0G36726 52.91 48.85 −0.12 down 31.05 4660.16 7.23 up
Lb4G25364 5.29 7.53 0.51 up 10.30 1219.19 6.89 up
Lb0G37372 77.23 82.87 0.10 up 85.21 4367.29 5.68 up
RRN16S.2: Chloroplast-encoded 16S ribosomal RNA.
Lb0G37563 15.63 13.01 −0.26 down 10.34 1074.28 6.69 up
Lb4G25504 12.09 16.79 0.47 up 16.42 1754.74 6.74 up
CRR42: Chloroplast NADH dehydrogenase assembly protein.
Lb3G18424 410.01 460.86 0.17 up 11.66 172.86 3.89 up
ATPA: Encodes the ATPase alpha subunit.
Lb4G23216 3.39 4.98 0.55 up 2.21 231.44 6.71 up
DALL5: Encodes a triacylglycerol lipase located in plastoglobuli.
Lb2G08239 3.00 39.17 3.70 up 2.47 31.23 3.66 up
RLK7: RLK7 belongs to a leucine-rich repeat class of receptor-likekinase (LRR-RLKs).
Lb4G23386 3.39 4.98 0.55 up 2.21 231.44 6.71 up
ABO8: Encodes ABO8, a pentatricopeptide repeat (PPR) protein.
Lb5G26864 26.36 57.19 1.12 up 10.52 99.57 3.24 up
NAD (P)-linked oxidoreductase superfamily protein.
Lb6G30054 26.36 57.19 1.12 up 10.52 99.57 3.24 up
ATGPX6: Encodes glutathione peroxidase.
Lb0G37493 298.78 536.27 0.84 up 200.86 711.49 1.82 up
HPCA1: Leucine rich receptor kinase.
Lb3G15760 399.21 115.54 −1.79 down 93.39 381.65 2.03 up
DCC1: Encodes a putative thioredoxin DCC1.
Lb2G08796 NS NS NS 2.78E-17 25.01 59.64 up
AO: Role in the degradation of ascorbate to (mono) dehydroascorbate.
Lb1G05941 NS 88.01 NS 7.87 77.58 3.30 up
MSRB1: 1-Cys methionine sulfoxide reductase.
Lb3G20002 26.25 24.76 −0.08 down 26.27 316.42 3.59 up
MAD3: Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase.
Lb3G18131 9.18 139.08 3.92 up 9.18 67.49 2.88 up
PRX17: Encodes a cell wall-localized class III peroxidase.
Lb0G37582 10.60 72.48 2.77 up 21.13 126.40 2.58 up
DSPTP1E: Encodes a protein phosphatase that interacts with MPK12.
Lb0G38281 9.09 124.93 3.78 up 9.18 67.49 2.88 up
FQR1: Encodes a flavin mononucleotide-binding flavodoxin-like quinone reductase.
Lb1G00304 1483.82 1629.17 0.13 up 574.94 1387.82 1.27 up
GH3.1: Encodes a protein similar to IAA-amido synthases.
Lb3G17391 38.75 35.25 −0.14 down 35.82 186.15 2.38 up
PGP21: Encodes a facultative transporter controlling auxin concentrations in plant cells.
Lb3G19218 33.44 NS NS 89.32 319.35 1.84 up
  1. Differentially expressed genes were filtered using the threshold of Informative/Non-Informative (I/NI) C 0.4 using the Dexus method. “FC (Fold change)” equals log2 (B2-FPKM/B1-FPKM or B4-FPKM/B3-FPKM), “up” represents up-regulated genes and “down” represents down-regulated genes. B1, 0 mM NaCl+ 0 μM melatonin; B2, 0 mM NaCl+ 5 μM melatonin; B3, 300 mM NaCl+ 0 μM melatonin; B1, 300 mM NaCl+ 5 μM melatonin