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Table 1 Differentially expressed and highly transcribed genes related to genes related to photosynthesis and reactive oxygen species scavenging in the different treatment Limonium bicolor leaves

From: Melatonin increases growth and salt tolerance of Limonium bicolor by improving photosynthetic and antioxidant capacity

Gene ID

B1

B2

FC

B3

B4

FC

ADG1: Encodes the small subunit of ADP-glucose pyrophosphorylase.

Lb0G37377

612.33

732.32

0.26 up

29.54

644.96

4.45 up

DGD2: Encodes a UDP-galactose-dependent digalactosyldiacylglycerol (DGDG) synthase.

Lb1G03486

96.50

1.96

−5.62 down

2.91

82.79

4.83 up

ATSUC4: Low affinity (10 mM) sucrose transporter in sieve elements (phloem).

Lb1G06992

4.05

65.24

4.01 up

4.28

121.09

4.82 up

Lb3G15617

24.60

NS

NS

2.46

52.38

4.41 up

Phosphofructokinase family protein.

Lb6G30828

22.58

201.71

3.16 up

20.99

361.12

4.10 up

PNAD-MDH: Encodes a protein with NAD-dependent malate dehydrogenase activity.

Lb1G04420

826.21

843.68

0.03 up

140.65

1082.78

2.94 up

PSBA: Encodes chlorophyll binding protein D1.

Lb0G36726

52.91

48.85

−0.12 down

31.05

4660.16

7.23 up

Lb4G25364

5.29

7.53

0.51 up

10.30

1219.19

6.89 up

Lb0G37372

77.23

82.87

0.10 up

85.21

4367.29

5.68 up

RRN16S.2: Chloroplast-encoded 16S ribosomal RNA.

Lb0G37563

15.63

13.01

−0.26 down

10.34

1074.28

6.69 up

Lb4G25504

12.09

16.79

0.47 up

16.42

1754.74

6.74 up

CRR42: Chloroplast NADH dehydrogenase assembly protein.

Lb3G18424

410.01

460.86

0.17 up

11.66

172.86

3.89 up

ATPA: Encodes the ATPase alpha subunit.

Lb4G23216

3.39

4.98

0.55 up

2.21

231.44

6.71 up

DALL5: Encodes a triacylglycerol lipase located in plastoglobuli.

Lb2G08239

3.00

39.17

3.70 up

2.47

31.23

3.66 up

RLK7: RLK7 belongs to a leucine-rich repeat class of receptor-likekinase (LRR-RLKs).

Lb4G23386

3.39

4.98

0.55 up

2.21

231.44

6.71 up

ABO8: Encodes ABO8, a pentatricopeptide repeat (PPR) protein.

Lb5G26864

26.36

57.19

1.12 up

10.52

99.57

3.24 up

NAD (P)-linked oxidoreductase superfamily protein.

Lb6G30054

26.36

57.19

1.12 up

10.52

99.57

3.24 up

ATGPX6: Encodes glutathione peroxidase.

Lb0G37493

298.78

536.27

0.84 up

200.86

711.49

1.82 up

HPCA1: Leucine rich receptor kinase.

Lb3G15760

399.21

115.54

−1.79 down

93.39

381.65

2.03 up

DCC1: Encodes a putative thioredoxin DCC1.

Lb2G08796

NS

NS

NS

2.78E-17

25.01

59.64 up

AO: Role in the degradation of ascorbate to (mono) dehydroascorbate.

Lb1G05941

NS

88.01

NS

7.87

77.58

3.30 up

MSRB1: 1-Cys methionine sulfoxide reductase.

Lb3G20002

26.25

24.76

−0.08 down

26.27

316.42

3.59 up

MAD3: Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase.

Lb3G18131

9.18

139.08

3.92 up

9.18

67.49

2.88 up

PRX17: Encodes a cell wall-localized class III peroxidase.

Lb0G37582

10.60

72.48

2.77 up

21.13

126.40

2.58 up

DSPTP1E: Encodes a protein phosphatase that interacts with MPK12.

Lb0G38281

9.09

124.93

3.78 up

9.18

67.49

2.88 up

FQR1: Encodes a flavin mononucleotide-binding flavodoxin-like quinone reductase.

Lb1G00304

1483.82

1629.17

0.13 up

574.94

1387.82

1.27 up

GH3.1: Encodes a protein similar to IAA-amido synthases.

Lb3G17391

38.75

35.25

−0.14 down

35.82

186.15

2.38 up

PGP21: Encodes a facultative transporter controlling auxin concentrations in plant cells.

Lb3G19218

33.44

NS

NS

89.32

319.35

1.84 up

  1. Differentially expressed genes were filtered using the threshold of Informative/Non-Informative (I/NI) C 0.4 using the Dexus method. “FC (Fold change)” equals log2 (B2-FPKM/B1-FPKM or B4-FPKM/B3-FPKM), “up” represents up-regulated genes and “down” represents down-regulated genes. B1, 0 mM NaCl+ 0 μM melatonin; B2, 0 mM NaCl+ 5 μM melatonin; B3, 300 mM NaCl+ 0 μM melatonin; B1, 300 mM NaCl+ 5 μM melatonin