From: tRNA-derived fragments from wheat are potentially involved in susceptibility to Fusarium head blight
tRF ID | Sequence | Length | CSM | CSI | SMM | SMI | Log2 (CSI/CSM) | Log2 (SMI/SMM) |
---|---|---|---|---|---|---|---|---|
tRF-Ala-AGC-1-1 #1 | GCGAGAGGTACGGGGATCG | 19 | 132 | 557 | 73 | 267 | 2.08 | 1.88 |
tRF-Ala-AGC-1-1 #6 | GGGGATGTAGCTCAGATGGTAG | 22 | 3470 | 1122 | 2600 | 1020 | -1.63 | -1.35 |
tRF-Ala-AGC-1-1 #9 | GGGGATGTAGCTCAGATGGTAGAGC | 25 | 7892 | 676 | 4697 | 914 | -3.54 | -2.36 |
tRF-Ala-CGC-1-1 | GCGAGAGGCACGGGGTTCG | 19 | 198 | 1048 | 108 | 654 | 2.40 | 2.60 |
tRF-Ala-UGC-2-1 #5 | GGGGATGTAGCTCAAATGGTAG | 22 | 1849 | 472 | 1534 | 578 | -1.97 | -1.41 |
tRF-Ala-UGC-2-1 #7 | GGGGATGTAGCTCAAATGGTAGAGC | 25 | 3663 | 309 | 2472 | 475 | -3.57 | -2.38 |
tRF-Asn-GUU-1-1 | AACCACAAGGTCGGAGGT | 18 | 36 | 1493 | 41 | 963 | 5.36 | 4.54 |
tRF-Cys-GCA-1-1 #1 | GGGTCCATAGCTCAGTGG | 18 | 1888 | 10909 | 1762 | 8410 | 2.53 | 2.26 |
tRF-Gln-CUG-10-1 | TCCAGTAACCCGAGTTCA | 18 | 90 | 1155 | 51 | 373 | 3.69 | 2.86 |
tRF-Gln-UUG-10-1 #3 | GGTTTCGTAGTGTAGTGGTTAG | 22 | 689 | 84 | 565 | 102 | -3.04 | -2.46 |
tRF-Gln-UUG-1-1 #1 | TCTGGCGACCTGGGTTCG | 18 | 78 | 1389 | 53 | 279 | 4.15 | 2.40 |
tRF-Gln-UUG-1-1 #2 | ATCTGGCGACCTGGGTTCG | 19 | 43 | 2029 | 35 | 1014 | 5.56 | 4.84 |
tRF-Glu-CUC-1-1 #1 | CCGTCGTAGTCTAGGTGG | 18 | 410 | 3198 | 292 | 1842 | 2.96 | 2.66 |
tRF-Glu-UUC-1-1 | TCCATTGTCGTCCAGCGG | 18 | 827 | 2866 | 1000 | 2629 | 1.79 | 1.40 |
tRF-His-AUG-1-1 #4 | GACAGTTTGGCCGAGTGGTCT | 21 | 758 | 217 | 725 | 260 | -1.80 | -1.48 |
tRF-His-GUG-1-1 #1 | GCCGTGGAGACCTGGGCT | 18 | 1592 | 17168 | 1167 | 12197 | 3.43 | 3.39 |
tRF-Ile-AAU-10-1 #1 | GGCCTATTAGCTCAGCTG | 18 | 515 | 1929 | 432 | 1125 | 1.91 | 1.38 |
tRF-Ile-UAU-1-1 #1 | CTCCCGTAGCTCAGTTGG | 18 | 26 | 778 | 8 | 306 | 4.92 | 5.20 |
tRF-iMet-CAU-10-1 #2 | TAACCCACAGGTCCCAGGATCG | 22 | 43 | 1698 | 31 | 1006 | 5.30 | 5.04 |
tRF-Leu-AAG-10-1 #3 | GATCAGATGGCCGAGTTGGT | 20 | 2410 | 847 | 1979 | 757 | -1.51 | -1.39 |
tRF-Lys-CUU-10-1 #1 | CCTTGTGGTCGTGGGTTC | 18 | 79 | 971 | 42 | 675 | 3.61 | 4.00 |
tRF-Lys-CUU-10-1 #2 | CCTTGTGGTCGTGGGTTCG | 19 | 69 | 1514 | 32 | 948 | 4.45 | 4.87 |
tRF-Lys-CUU-10-1 #3 | AACCTTGTGGTCGTGGGTTC | 20 | 84 | 994 | 44 | 688 | 3.57 | 3.98 |
tRF-Lys-CUU-10-1 #4 | AACCTTGTGGTCGTGGGTTCG | 21 | 301 | 6962 | 213 | 4317 | 4.53 | 4.34 |
tRF-Lys-CUU-10-1 #5 | TAACCTTGTGGTCGTGGGTTCG | 22 | 57 | 1612 | 51 | 930 | 4.81 | 4.20 |
tRF-Lys-CUU-1-1 #2 | GCCCGTCTAGCTCAGTCGG | 19 | 900 | 5128 | 849 | 4114 | 2.51 | 2.28 |
tRF-Lys-CUU-1-1 #3 | GCCCGTCTAGCTCAGTCGGT | 20 | 8242 | 21424 | 3721 | 18462 | 1.38 | 2.31 |
tRF-Lys-CUU-12-1 #1 | CCCGTCTAGCTCAGTTGG | 18 | 41 | 1279 | 21 | 484 | 4.95 | 4.53 |
tRF-Lys-CUU-12-1 #4 | GCCCGTCTAGCTCAGTTGG | 19 | 2763 | 10617 | 2112 | 5761 | 1.94 | 1.45 |
tRF-Lys-CUU-12-1 #2 | CCCGTCTAGCTCAGTTGGT | 19 | 230 | 5333 | 167 | 2542 | 4.54 | 3.93 |
tRF-Lys-UUU-1-1 #1 | GCCGTCTTAGCTCAGTTGG | 19 | 154 | 807 | 123 | 432 | 2.39 | 1.81 |
tRF-Lys-UUU-2-1 #1 | CCGACCTAGCTCAGTGGT | 18 | 174 | 883 | 103 | 806 | 2.34 | 2.97 |
tRF-Lys-UUU-2-1 #2 | GCCGACCTAGCTCAGTGG | 18 | 1611 | 5643 | 1438 | 3708 | 1.81 | 1.37 |
tRF-Lys-UUU-3-1 #1 | GCCGTCCTAGCTCAGTTGG | 19 | 302 | 1335 | 265 | 823 | 2.15 | 1.64 |
tRF-Met-CAU-10-1 | TCCTGAGGTCGAGAGTTC | 18 | 331 | 1750 | 256 | 1139 | 2.40 | 2.16 |
tRF-Phe-GAA-10-1 #2 | TCTGAAGGTCGCGTGTTCG | 19 | 200 | 1396 | 123 | 873 | 2.80 | 2.83 |
tRF-Phe-GAA-10-1 #3 | ATCTGAAGGTCGCGTGTTCG | 20 | 95 | 676 | 82 | 447 | 2.84 | 2.44 |
tRF-Phe-GAA-1-1 | GCGGGGATAGCTCAGTTG | 18 | 424 | 1119 | 226 | 1145 | 1.40 | 2.34 |
tRF-Pro-AGG-10-1 #2 | GCGAGAGGTCCCGAGTTC | 18 | 354 | 1317 | 413 | 848 | 1.89 | 1.04 |
tRF-Pro-AGG-10-1 #3 | GTGCGAGAGGTCCCGAGT | 18 | 74 | 640 | 75 | 750 | 3.12 | 3.32 |
tRF-Pro-CGG-1-1 | GCGAGAGGTCCCGAGTTCG | 19 | 175 | 1348 | 125 | 799 | 2.95 | 2.68 |
tRF-Thr-CGU-1-1 #1 | CCTCCGTAGCATAGTGGT | 18 | 1256 | 4100 | 507 | 3699 | 1.71 | 2.87 |
tRF-Trp-CCA-1-1 | TCAGAAGGTTGCGTGTTCG | 19 | 192 | 1468 | 110 | 920 | 2.94 | 3.07 |
tRF-Tyr-AUA-1-1 #2 | CCGACCTTAGCTCAGTTGG | 19 | 5560 | 18222 | 5276 | 11434 | 1.71 | 1.12 |
tRF-Val-AAC-1-1 #2 | ACTGAAGGTCTCCGGTTCG | 19 | 59 | 524 | 46 | 420 | 3.16 | 3.20 |
tRF-Val-AAC-1-1 #3 | CTGAAGGTCTCCGGTTCG | 18 | 66 | 892 | 61 | 620 | 3.76 | 3.34 |
tRF-Val-CAC-10-1 #3 | GTCTGGGTGGTGTAGTTGGTTAT | 23 | 630 | 32 | 542 | 53 | -4.28 | -3.36 |
tRF-Val-CAC-10-1 #4 | GTCTGGGTGGTGTAGTTGGTTATC | 24 | 755 | 35 | 593 | 94 | -4.42 | -2.65 |