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Table 1 Differentially expressed tRFs between CS and SM after F. graminearum (CSI and SMI) or mung bean broth (CSM and SMM) inoculation

From: tRNA-derived fragments from wheat are potentially involved in susceptibility to Fusarium head blight

tRF ID

Sequence

Length

CSM

CSI

SMM

SMI

Log2

(CSI/CSM)

Log2

(SMI/SMM)

tRF-Ala-AGC-1-1 #1

GCGAGAGGTACGGGGATCG

19

132

557

73

267

2.08

1.88

tRF-Ala-AGC-1-1 #6

GGGGATGTAGCTCAGATGGTAG

22

3470

1122

2600

1020

-1.63

-1.35

tRF-Ala-AGC-1-1 #9

GGGGATGTAGCTCAGATGGTAGAGC

25

7892

676

4697

914

-3.54

-2.36

tRF-Ala-CGC-1-1

GCGAGAGGCACGGGGTTCG

19

198

1048

108

654

2.40

2.60

tRF-Ala-UGC-2-1 #5

GGGGATGTAGCTCAAATGGTAG

22

1849

472

1534

578

-1.97

-1.41

tRF-Ala-UGC-2-1 #7

GGGGATGTAGCTCAAATGGTAGAGC

25

3663

309

2472

475

-3.57

-2.38

tRF-Asn-GUU-1-1

AACCACAAGGTCGGAGGT

18

36

1493

41

963

5.36

4.54

tRF-Cys-GCA-1-1 #1

GGGTCCATAGCTCAGTGG

18

1888

10909

1762

8410

2.53

2.26

tRF-Gln-CUG-10-1

TCCAGTAACCCGAGTTCA

18

90

1155

51

373

3.69

2.86

tRF-Gln-UUG-10-1 #3

GGTTTCGTAGTGTAGTGGTTAG

22

689

84

565

102

-3.04

-2.46

tRF-Gln-UUG-1-1 #1

TCTGGCGACCTGGGTTCG

18

78

1389

53

279

4.15

2.40

tRF-Gln-UUG-1-1 #2

ATCTGGCGACCTGGGTTCG

19

43

2029

35

1014

5.56

4.84

tRF-Glu-CUC-1-1 #1

CCGTCGTAGTCTAGGTGG

18

410

3198

292

1842

2.96

2.66

tRF-Glu-UUC-1-1

TCCATTGTCGTCCAGCGG

18

827

2866

1000

2629

1.79

1.40

tRF-His-AUG-1-1 #4

GACAGTTTGGCCGAGTGGTCT

21

758

217

725

260

-1.80

-1.48

tRF-His-GUG-1-1 #1

GCCGTGGAGACCTGGGCT

18

1592

17168

1167

12197

3.43

3.39

tRF-Ile-AAU-10-1 #1

GGCCTATTAGCTCAGCTG

18

515

1929

432

1125

1.91

1.38

tRF-Ile-UAU-1-1 #1

CTCCCGTAGCTCAGTTGG

18

26

778

8

306

4.92

5.20

tRF-iMet-CAU-10-1 #2

TAACCCACAGGTCCCAGGATCG

22

43

1698

31

1006

5.30

5.04

tRF-Leu-AAG-10-1 #3

GATCAGATGGCCGAGTTGGT

20

2410

847

1979

757

-1.51

-1.39

tRF-Lys-CUU-10-1 #1

CCTTGTGGTCGTGGGTTC

18

79

971

42

675

3.61

4.00

tRF-Lys-CUU-10-1 #2

CCTTGTGGTCGTGGGTTCG

19

69

1514

32

948

4.45

4.87

tRF-Lys-CUU-10-1 #3

AACCTTGTGGTCGTGGGTTC

20

84

994

44

688

3.57

3.98

tRF-Lys-CUU-10-1 #4

AACCTTGTGGTCGTGGGTTCG

21

301

6962

213

4317

4.53

4.34

tRF-Lys-CUU-10-1 #5

TAACCTTGTGGTCGTGGGTTCG

22

57

1612

51

930

4.81

4.20

tRF-Lys-CUU-1-1 #2

GCCCGTCTAGCTCAGTCGG

19

900

5128

849

4114

2.51

2.28

tRF-Lys-CUU-1-1 #3

GCCCGTCTAGCTCAGTCGGT

20

8242

21424

3721

18462

1.38

2.31

tRF-Lys-CUU-12-1 #1

CCCGTCTAGCTCAGTTGG

18

41

1279

21

484

4.95

4.53

tRF-Lys-CUU-12-1 #4

GCCCGTCTAGCTCAGTTGG

19

2763

10617

2112

5761

1.94

1.45

tRF-Lys-CUU-12-1 #2

CCCGTCTAGCTCAGTTGGT

19

230

5333

167

2542

4.54

3.93

tRF-Lys-UUU-1-1 #1

GCCGTCTTAGCTCAGTTGG

19

154

807

123

432

2.39

1.81

tRF-Lys-UUU-2-1 #1

CCGACCTAGCTCAGTGGT

18

174

883

103

806

2.34

2.97

tRF-Lys-UUU-2-1 #2

GCCGACCTAGCTCAGTGG

18

1611

5643

1438

3708

1.81

1.37

tRF-Lys-UUU-3-1 #1

GCCGTCCTAGCTCAGTTGG

19

302

1335

265

823

2.15

1.64

tRF-Met-CAU-10-1

TCCTGAGGTCGAGAGTTC

18

331

1750

256

1139

2.40

2.16

tRF-Phe-GAA-10-1 #2

TCTGAAGGTCGCGTGTTCG

19

200

1396

123

873

2.80

2.83

tRF-Phe-GAA-10-1 #3

ATCTGAAGGTCGCGTGTTCG

20

95

676

82

447

2.84

2.44

tRF-Phe-GAA-1-1

GCGGGGATAGCTCAGTTG

18

424

1119

226

1145

1.40

2.34

tRF-Pro-AGG-10-1 #2

GCGAGAGGTCCCGAGTTC

18

354

1317

413

848

1.89

1.04

tRF-Pro-AGG-10-1 #3

GTGCGAGAGGTCCCGAGT

18

74

640

75

750

3.12

3.32

tRF-Pro-CGG-1-1

GCGAGAGGTCCCGAGTTCG

19

175

1348

125

799

2.95

2.68

tRF-Thr-CGU-1-1 #1

CCTCCGTAGCATAGTGGT

18

1256

4100

507

3699

1.71

2.87

tRF-Trp-CCA-1-1

TCAGAAGGTTGCGTGTTCG

19

192

1468

110

920

2.94

3.07

tRF-Tyr-AUA-1-1 #2

CCGACCTTAGCTCAGTTGG

19

5560

18222

5276

11434

1.71

1.12

tRF-Val-AAC-1-1 #2

ACTGAAGGTCTCCGGTTCG

19

59

524

46

420

3.16

3.20

tRF-Val-AAC-1-1 #3

CTGAAGGTCTCCGGTTCG

18

66

892

61

620

3.76

3.34

tRF-Val-CAC-10-1 #3

GTCTGGGTGGTGTAGTTGGTTAT

23

630

32

542

53

-4.28

-3.36

tRF-Val-CAC-10-1 #4

GTCTGGGTGGTGTAGTTGGTTATC

24

755

35

593

94

-4.42

-2.65

  1. “tRF ID” originates from the tRNA name of wheat tRNA database (http://gtrnadb.ucsc.edu/GtRNAdb2/). The values in CSM, CSI, SMM and SMI columns were the TPM (Transcript per million reads) values over three replicates.