From: Gene expression programs during callus development in tissue culture of two Eucalyptus species
GeneID | A4 vs A3 | A5 vs A3 | B4 vs B3 | B5 vs B3 | Description | ||||
---|---|---|---|---|---|---|---|---|---|
log2FC | FDR | log2FC | FDR | log2FC | FDR | log2FC | FDR | ||
Eucgr.F00590 | 2.13 | 3.89E-07 | -1.80 | 1.67E-05 | 0.09 | 8.85E-01 | -0.57 | 2.90E-01 | snakin-2 |
Eucgr.F02674 | 1.84 | 1.46E-05 | -1.50 | 4.74E-04 | -0.93 | 3.80E-02 | -0.04 | 9.67E-01 | putative laccase-9 |
Eucgr.I01646 | 1.02 | 2.50E-02 | -2.61 | 7.28E-10 | 0.52 | 2.88E-01 | 0.54 | 3.20E-01 | ribonucleoside-diphosphate reductase small chain |
Eucgr.I01402 | 1.16 | 8.59E-03 | -1.18 | 5.71E-03 | 2.45 | 4.24E-09 | 2.08 | 1.19E-06 | subtilisin-like protease SBT1.6 |
Eucgr.I00773 | 1.94 | 3.88E-06 | -1.90 | 6.11E-06 | 3.99 | 5.72E-20 | 0.12 | 8.73E-01 | cytochrome P450 81E8 |
Eucgr.A02259 | 2.06 | 6.33E-06 | -2.43 | 1.07E-05 | 0.68 | 1.78E-01 | -1.44 | 5.13E-03 | two-component response regulator ARR9 |
Eucgr.F03389 | 1.25 | 5.44E-03 | -2.12 | 1.91E-06 | 1.71 | 7.18E-05 | 1.14 | 1.75E-02 | uncharacterized LOC104450184 |
Eucgr.A01788 | 1.02 | 2.38E-02 | -1.73 | 3.80E-05 | 0.42 | 4.01E-01 | 0.52 | 3.41E-01 | protein STRUBBELIG-RECEPTOR FAMILY 3 |
Eucgr.J00130 | 1.47 | 8.30E-04 | -1.22 | 6.59E-03 | 0.82 | 7.80E-02 | -0.24 | 7.20E-01 | mini-chromosome maintenance complex-binding protein |
Eucgr.G01769 | 2.22 | 2.55E-07 | -2.83 | 1.65E-09 | 0.78 | 9.25E-02 | -0.31 | 6.38E-01 | auxin transporter-like protein 5 |
Eucgr.A02888 | 1.19 | 7.30E-03 | -2.40 | 1.92E-08 | 0.29 | 6.03E-01 | -1.17 | 1.46E-02 | beta-fructofuranosidase, soluble isoenzyme I |
Eucgr.D02581 | 1.73 | 5.13E-05 | -1.16 | 8.55E-03 | 0.70 | 1.32E-01 | -1.47 | 1.21E-03 | protein NUCLEAR FUSION DEFECTIVE 4 |
Eucgr.F02389 | 2.02 | 1.70E-06 | -3.03 | 5.18E-12 | 0.82 | 6.87E-02 | 0.00 | 1.00E+00 | lysine histidine transporter-like 8 |
Eucgr.C00963 | 3.36 | 1.04E-14 | -1.26 | 5.33E-03 | 3.77 | 5.62E-18 | -2.37 | 2.25E-07 | uncharacterized LOC104436549 |
Eucgr.I02451 | 1.23 | 5.27E-03 | -1.67 | 7.39E-05 | 0.98 | 2.63E-02 | 1.08 | 2.08E-02 | |
Eucgr.B03374 | 2.55 | 1.52E-09 | -2.41 | 1.56E-08 | 1.29 | 2.47E-03 | 0.62 | 2.44E-01 | two-component response regulator ARR6 |
Eucgr.G00651 | 1.20 | 7.36E-03 | -1.98 | 5.43E-06 | 0.69 | 2.25E-01 | 0.00 | 1.00E+00 | beta-xylosidase/alpha-L-arabinofuranosidase 2 |
Eucgr.J02473 | 1.25 | 6.05E-03 | -1.43 | 1.78E-03 | 1.89 | 1.70E-05 | 0.66 | 2.54E-01 | F-box protein At4g35930 |
Eucgr.B02127 | 2.15 | 3.47E-07 | -1.82 | 1.81E-05 | 2.52 | 1.53E-09 | -0.99 | 3.66E-02 | GRF1-interacting factor 1 |
Eucgr.H02960 | 1.39 | 1.30E-03 | -1.81 | 2.04E-05 | 0.16 | 7.81E-01 | -0.88 | 7.30E-02 | acid phosphatase 1 |
Eucgr.I02738 | 1.16 | 9.56E-03 | -1.21 | 5.21E-03 | 0.63 | 1.91E-01 | 0.32 | 6.04E-01 | uncharacterized protein C594.04c |
Eucgr.A01269 | 2.96 | 1.54E-11 | -3.82 | 6.19E-12 | 8.78 | 2.27E-43 | 0.00 | 1.00E+00 | |
Eucgr.B02620 | 3.95 | 2.73E-19 | -2.09 | 1.40E-06 | 0.77 | 8.82E-02 | -0.66 | 2.00E-01 | defensin Ec-AMP-D2 |
Eucgr.C00947 | 1.15 | 1.11E-02 | -1.37 | 1.89E-03 | -0.48 | 3.37E-01 | -2.09 | 1.48E-06 | transcription factor MYB36 |
Eucgr.K01490 | 1.33 | 2.57E-03 | -1.44 | 9.35E-04 | 1.28 | 3.32E-03 | 0.04 | 9.62E-01 | short-chain type dehydrogenase/reductase |
Eucgr.E00854 | 1.15 | 1.16E-02 | -2.57 | 2.36E-08 | 0.38 | 4.74E-01 | -0.28 | 6.84E-01 | DNA primase small subunit |
Eucgr.E04221 | 1.09 | 1.59E-02 | -3.24 | 1.99E-13 | -1.22 | 4.18E-03 | -1.42 | 1.34E-03 | |
Eucgr.H01043 | 1.54 | 3.42E-04 | -1.84 | 1.87E-05 | 0.59 | 2.16E-01 | 0.20 | 7.66E-01 | DNA replication licensing factor MCM7 |
Eucgr.B03659 | 1.93 | 6.45E-06 | -1.16 | 9.24E-03 | 2.09 | 6.52E-06 | 0.00 | 1.00E+00 | beta-glucosidase 12 |
Eucgr.B00882 | 1.19 | 7.32E-03 | -1.23 | 4.71E-03 | -0.89 | 4.77E-02 | -2.23 | 4.02E-07 | |
Eucgr.I01419 | 1.85 | 1.31E-05 | -1.84 | 1.98E-05 | 2.47 | 5.37E-09 | 0.23 | 7.41E-01 | probable BOI-related E3 ubiquitin-protein ligase 2 |
Eucgr.C00146 | 1.27 | 3.69E-03 | -3.49 | 7.69E-16 | -1.22 | 4.36E-03 | -2.53 | 3.45E-09 | serine carboxypeptidase-like 18 |
Eucgr.G01113 | 1.29 | 3.14E-03 | -1.85 | 9.86E-06 | -0.14 | 8.09E-01 | -1.24 | 6.46E-03 | serine carboxypeptidase-like 18 |
Eucgr.I01654 | 1.33 | 2.12E-03 | -1.63 | 1.19E-04 | 0.98 | 2.61E-02 | -3.55 | 1.70E-15 | chloride channel protein CLC-b |
Eucgr.B03426 | 1.18 | 7.71E-03 | -1.17 | 6.93E-03 | 0.86 | 6.02E-02 | 0.18 | 8.00E-01 | HVA22-like protein c |
Eucgr.I02367 | 1.30 | 3.07E-03 | -2.08 | 1.26E-06 | 0.49 | 3.32E-01 | 0.69 | 1.94E-01 | probable LRR receptor-like serine/threonine-protein kinase At4g36180 |
Eucgr.C00405 | 1.12 | 1.28E-02 | -2.27 | 1.66E-07 | 0.62 | 1.93E-01 | -0.30 | 6.39E-01 | DNA replication licensing factor MCM5 |
Eucgr.H04921 | 1.06 | 2.02E-02 | -1.07 | 1.60E-02 | 0.09 | 9.47E-01 | 0.00 | 1.00E+00 | G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3 |
Eucgr.F04160 | 2.30 | 4.37E-08 | -1.51 | 3.56E-04 | -1.02 | 1.95E-02 | -0.15 | 8.22E-01 | putative laccase-9 |
Eucgr.F02649 | 2.03 | 1.36E-06 | -1.67 | 7.46E-05 | -0.30 | 5.73E-01 | 1.10 | 1.71E-02 | putative laccase-9 |
Eucgr.E01780 | 1.95 | 6.39E-06 | -1.08 | 2.05E-02 | -1.21 | 5.64E-03 | -1.64 | 2.45E-04 | non-specific phospholipase C3 |
Eucgr.C02990 | 1.56 | 2.50E-04 | -2.20 | 1.25E-07 | 1.00 | 2.21E-02 | -0.99 | 3.55E-02 | zinc finger CCCH domain-containing protein 2 |
Eucgr.E00357 | 1.97 | 4.88E-06 | -1.11 | 1.59E-02 | -3.72 | 8.85E-14 | -2.38 | 7.05E-07 | expansin-like B1 |
Eucgr.K02657 | -1.51 | 5.42E-04 | 1.10 | 1.11E-02 | -0.58 | 3.15E-01 | 1.51 | 2.07E-03 | leucoanthocyanidin reductase |
Eucgr.E03884 | -2.03 | 1.32E-06 | 1.62 | 1.09E-04 | -3.69 | 1.12E-17 | -1.80 | 3.07E-05 | uncharacterized LOC104445607 |
Eucgr.B03985 | -2.64 | 1.13E-09 | 2.09 | 6.02E-07 | -1.65 | 9.50E-05 | -2.30 | 1.10E-07 | transcription factor MYB108 |
Eucgr.G00055 | -1.06 | 2.85E-02 | 1.25 | 4.14E-03 | 0.00 | 1.00E+00 | 0.00 | 1.00E+00 | |
Eucgr.B02752 | -2.17 | 4.55E-07 | 1.19 | 5.43E-03 | -0.59 | 2.29E-01 | 1.78 | 4.97E-05 | laccase-7 |
Eucgr.F03488 | -1.29 | 4.03E-03 | 1.15 | 7.78E-03 | -3.35 | 5.45E-13 | -0.84 | 1.05E-01 | protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 |
Eucgr.D00536 | -1.15 | 1.27E-02 | 1.81 | 1.80E-05 | 0.25 | 6.66E-01 | -1.49 | 1.12E-03 | GDSL esterase/lipase At5g45920 |
Eucgr.B02347 | -1.45 | 1.14E-03 | 1.12 | 1.00E-02 | -2.89 | 1.06E-10 | 0.64 | 2.37E-01 | scarecrow-like protein 34 |