Table 2 Callus devleopment associated genes identified in the two Eucalyptus species.
From: Gene expression programs during callus development in tissue culture of two Eucalyptus species
GeneID | A4 vs A3 | A5 vs A3 | B4 vs B3 | B5 vs B3 | Description | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Log2FC | FDR | Regulation | Log2FC | FDR | Regulation | Log2FC | FDR | Regulation | Log2FC | FDR | Regulation | ||
Eucgr.C00733 | 1.32 | 2.51E-03 | UP | -1.42 | 8.56E-04 | DOWN | 1.48 | 4.42E-04 | UP | -1.13 | 1.60E-02 | DOWN | uncharacterized LOC104436353 |
Eucgr.D00640 | 3.29 | 1.32E-14 | UP | -5.14 | 3.13E-28 | DOWN | 2.63 | 3.08E-10 | UP | -4.89 | 4.07E-26 | DOWN | stem-specific protein TSJT1 |
Eucgr.B00171 | 1.76 | 3.08E-05 | UP | -3.61 | 3.72E-16 | DOWN | 2.01 | 1.28E-06 | UP | -3.43 | 7.10E-15 | DOWN | BTB/POZ and TAZ domain-containing protein 1 |
Eucgr.C00948 | 2.25 | 8.81E-08 | UP | -1.88 | 7.15E-06 | DOWN | 1.41 | 8.32E-04 | UP | -1.52 | 5.37E-04 | DOWN | zinc finger CCCH domain-containing protein 20 |
Eucgr.J00388 | 1.89 | 7.29E-06 | UP | -1.78 | 2.27E-05 | DOWN | 1.63 | 9.11E-05 | UP | -2.05 | 1.71E-06 | DOWN | E3 ubiquitin-protein ligase MIEL1 |
Eucgr.A02118 | 1.35 | 1.83E-03 | UP | -2.41 | 8.00E-09 | DOWN | 1.14 | 8.06E-03 | UP | -1.98 | 4.10E-06 | DOWN | beta-glucosidase BoGH3B |
Eucgr.B00946 | 1.79 | 2.20E-05 | UP | -1.64 | 9.29E-05 | DOWN | 2.05 | 8.96E-07 | UP | -1.27 | 5.71E-03 | DOWN | phosphoethanolamine N-methyltransferase 1 |
Eucgr.K01667 | 1.56 | 2.89E-04 | UP | -1.26 | 4.02E-03 | DOWN | 1.14 | 8.17E-03 | UP | -1.94 | 9.06E-06 | DOWN | stomatal closure-related actin-binding protein 3 |
Eucgr.I02209 | 1.79 | 2.28E-05 | UP | -6.17 | 6.26E-33 | DOWN | 2.40 | 9.16E-09 | UP | -3.30 | 6.38E-13 | DOWN | monosaccharide-sensing protein 2 |
Eucgr.J00733 | 1.03 | 2.39E-02 | UP | -3.43 | 1.34E-14 | DOWN | 1.45 | 7.08E-04 | UP | -1.03 | 3.46E-02 | DOWN | ubiquitin-conjugating enzyme E2 20 |
Eucgr.K01283 | 5.32 | 9.76E-30 | UP | -1.05 | 2.65E-02 | DOWN | 4.70 | 1.24E-25 | UP | -5.31 | 1.10E-25 | DOWN | non-specific lipid-transfer protein 1 |
Eucgr.F03138 | 2.84 | 1.64E-11 | UP | -1.13 | 8.51E-03 | DOWN | 2.20 | 1.11E-07 | UP | -2.17 | 4.10E-07 | DOWN | beta-fructofuranosidase, insoluble isoenzyme CWINV1 |
Eucgr.D02029 | 2.49 | 3.32E-09 | UP | -1.31 | 2.40E-03 | DOWN | 3.65 | 2.44E-17 | UP | -1.68 | 1.98E-04 | DOWN | |
Eucgr.C00663 | -1.62 | 1.96E-04 | DOWN | 1.15 | 7.47E-03 | UP | -1.65 | 9.68E-05 | DOWN | 1.27 | 4.82E-03 | UP | glutaredoxin-C10 |
Eucgr.C00419 | -1.68 | 3.47E-04 | DOWN | 2.07 | 1.54E-06 | UP | -4.03 | 1.35E-17 | DOWN | 1.08 | 2.18E-02 | UP | UPF0481 protein At3g47200 |