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Table 3 Genomic regions associated with Phytophthora capsici root rot resistance represented as the area under disease progress curve (AUDPC) for the New Mexico RIL (NMRIL) population

From: Genomic regions and candidate genes linked with Phytophthora capsici root rot resistance in chile pepper (Capsicum annuum L.)

QTL Peak SNP marker QTL Model Chr. Location (Mb) Location (cM) LOD 1.5 LOD interval (cM) Percent variation explained
QTL.Pc5 SCM002816.1_34981103 y = Q P5 34.98 81.2 5.20 76.0-81.2 30.4
QTL.Pc8.1 SCM002819.1_132653758 y = Q P8 132.65 82.9 3.10 82.93-94.0 19.7
QTL.Pc9 SCM002820.1_235989419 y = Q P9 235.99 18.0 3.40 18.0-29.76 21.0
QTL.Pc5 x QTL.Pc8.1 SCM002816.1_34981103; SCM002819.1_132653758 y = Q1 + Q2 + Q1 x Q2 P5_P8 34.98_132.65 81.2_82.9 11.68f (8.14ad) 76.0-94.0 55.7 (43.3ad)
QTL.Pc8.1 x QTL.Pc8.2 SCM002819.1_13265375; SCM002819.1_133538774 y = Q1 + Q2 + Q1 x Q2 P8_P8 132.65_133.54 82.9_78.0 6.35ad 82.93-94.0 35.8ad
  1. adAdditive effect model. Unless otherwise indicated, the percent variation explained represents the values for the full QTL model
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BMC Plant Biology

ISSN: 1471-2229

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