Skip to main content

Table 3 Results of BLASTN searches using sequences from the AFLP fragments

From: A novel locus (Bnsdt2) in a TFL1 homologue sustaining determinate growth in Brassica napus

AFLP marker

Linkage group (position)

Identity

Homologous gene in B. napus

W01

chrC06 (33277106–33,277,022)

153, 8E-36, 83/85 (97%)

 

W02

chrCnn_random (49341751–49,341,629)

228, 2e-15, 83/85 (97%)

GSBRNA2T00052245001

W03

chrCnn_random (2405842–2,406,040)

389, e-106, 209/212 (98%)

GSBRNA2T00038164001

W04

chrCnn_random (70990276–70,990,314)

78, 3e-13, 39/39 (100%)

 

W05

chrCnn_random (11845806–11,846,104)

593, e-168, 299/299 (100%)

 

W06

chrCnn_random (60484242–60,484,083)

317,3 e-85, 160/160 (100%)

 
  1. In the “Linkage group” column, the numbers in the brackets indicate the position of the B. napus homologous sequence corresponding to our sequence. In the “Identity” column, the first and second numbers are the score and the expected value (E value) given by BLASTN, respectively; the fraction indicates the numbers of residues that are identical in our sequence and the corresponding B. napus sequence