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Fig. 3 | BMC Plant Biology

Fig. 3

From: California TRV-based VIGS vectors mediate gene silencing at elevated temperatures but with greater growth stunting

Fig. 3

Phylogenetic analysis of RNA1 and RNA2 genomes of the TRV California isolate. Phylogenetic trees showing the relationship between A) RNA1 genomes of fifteen TRV isolates and RNA1 of the California isolate and B) between RNA2 genomes of sixteen TRV isolates and RNA2 of the California isolate. The nucleotide sequences were aligned using the ClustalW method and the trees were constructed by neighbor-joining method using MEGA version 5 [36]. Numbers close to the nodes indicate bootstrap values and the scale shows 0.1 nucleotide substitutions per site. The deduced nucleotide sequences were retrieved from the NCBI GenBank database

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