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Table 3 Deregulated miRNA in CDPs cultured for 120 h vs protoplast. * no reads in protoplasts. ** no reads in cells cultured for 120 h; ↑ - increase or ↓ - decrease fold change

From: MicroRNA biogenesis and activity in plant cell dedifferentiation stimulated by cell wall removal

miRNA

log2FC

miRNA

log2FC

miRNA

log2FC

miR8177

↓ **

miR824-3p

1565

miR390a-3p

2,31

miR8175

-3,34

miR823

1448

miR3434-3p

3,07

miR8169

-3381

miR775

2,53

miR319c

2115

miR8168

↓ **

miR472-5p

2992

miR319b

6892

miR8166

− 4524

miR472-3p

1634

miR319a

4493

miR5996

− 1889

miR406

− 2729

miR173-3p

1285

miR5653

− 4935

miR400

− 1935

miR171b-5p

2076

miR5635c

↓ **

miR399f

−1,78

miR171a − 3p

-3131

miR5028

↑ *

miR399d

− 1881

miR170-3p

−1,94

miR5026

2527

miR399c-5p

− 2247

miR168b − 3p

2526

miR5020b

-3416

miR399c-3p

− 2289

miR168a-3p

2188

miR870-3p

↑ *

miR399b

− 5208

miR167d

− 1919

miR866 − 5p

2741

miR398c-3p

-5122

miR167c-5p

−1587

miR866-3p

4441

miR398b-3p

− 5111

miR167b

− 2199

miR863-3p

1845

miR398a-5p

↑ *

miR167a-5p

− 2194

miR861-5p

2,22

miR396b-5p

−2,68

miR166e-5p

2295

miR859

3,16

miR396a-3p

3763

miR163

− 4361

miR841b-5p

3609

miR395a

2896

miR160c-3p

2201

miR841b-3p

2435

miR393b-3p

2447

miR160a-3p

1559

miR841a-3p

2341

miR393a-3p

4363

miR158a-5p

2528

miR840-5p

4427

miR3933

↑ *

miR157c-3p

− 2204

miR829-5p

4118

miR390a-5p

1504

miR156b-3p

1774