Table 3 Identification of novel miRNAs on the other arm of known pre-miRNAs in Brassica napus
bna-miRNA name | mature miRNA sequence | Length | Read count |
|---|---|---|---|
bna-miR156f-3p | GCUCACUGCUCUUUCUGUCAGA | 22 | 749 |
bna-miR156e-3p | UGCUCACCUCUCUUUCUGUCAGU | 23 | 344 |
bna-miR160a-3p | GCGUAUGAGGAGCCAUGCAUA | 21 | 32 |
bna-miR160c-3p | GCGUACAGAGUAGUCAAGCAUG | 22 | 24 |
bna-miR160d-3p | GCGUACAGAGUAGUCAAGCAUG | 22 | 24 |
bna-miR161-3p | GUCACUUUCAAUGCGUUGAUC | 21 | 7 |
bna-miR164b/c/d-3p | CACGUGUUCUACUACUCCAAC | 21 | 21 |
bna-miR166d-5p | GGACUGUUGUCUGGCUCGAGG | 21 | 135 |
bna-miR166e-5p | GGAAUGUUGUCUGGCACGAGG | 21 | 10 |
bna-miR166f-5p | GGAAUGUUGUCUGGAUCGAGG | 21 | 202 |
bna-miR167a/b-3p | GAUCAUGUUCGCAGUUUCACC | 21 | 750 |
bna-miR167a/b-3p | GAUCAUGUUCGCAGUUUCACC | 21 | 750 |
bna-miR168a-3p | CCCGCCUUGUAUCAAGUGAAU | 21 | 104 |
bna-miR171a/b/c-5p | AGAUAUUAGUGCGGUUCAAUC | 21 | 51 |
bna-miR171d-5p | AGAUAUUGGUGCGGUUCAAUC | 21 | 12 |
bna-miR172a-5p | GCAGCACCAUCAAGAUUCAC | 20 | 48 |
bna-miR172b-5p | GCAGCAUCAUUAAGAUUCACA | 21 | 3 |
bna-miR172c-5p | GCAGCAUCAUCAAGAUUCACA | 21 | 9 |
bna-miR172d-5p | GCAUCAUCAUCAAGAUUCAGA | 21 | 218 |
bna-miR2111d-3p | AUCCUCGGGAUACGGAUUACC | 21 | 25 |
bna-miR390b-3p | CGCUGUCCAUCCUGAGUUUCA | 21 | 1109 |
bna-miR390c-3p | CGCUAUCCAUCCUGAGUUCC | 20 | 19 |
bna-miR395a/b/c-5p | GUUCCUCUGAGCACUUCAUUG | 21 | 61 |
bna-miR395d/f-5p | GUUCCCUUUAACGCUUCAUUG | 21 | 13 |
bna-miR399b-5p | GGGCAAGAUCUCUAUUGGCAGG | 22 | 12 |
bna-miR403-5p | UGUUUUGUGCGUGAAUCUAAUU | 22 | 287 |
bna-miR824-3p | CCUUCUCAUCGAUGGUCUAGA | 21 | 1640 |