Identification of genomic regions affecting grain peroxidase activity in bread wheat using genome-wide association study

Table 2 Information for QTL associated with POD activity identified via GWAS

Num^a	QTL	Peak SNP	Chr^b	Position (bp)	Environment^c	-log₁₀P	R² (%)
1	qPOD1D.1	AX-109976378	1DL	462,948,362	SQ, KF	3.05 ~ 3.24	7.10 ~ 7.26
2	qPOD2A.1	AX-108731680	2AS	89,491,698	SQ, KF, BLUP	3.01 ~ 4.47	7.00 ~ 10.16
3	qPOD2A.2	AX-111561344	2AL	711,975,486	YY, BLUP	3.33 ~ 4.19	7.64 ~ 9.77
4	qPOD2A.3	AX-111137980	2AL	752,916,492	KF, BLUP	3.07 ~ 3.68	5.59 ~ 7.19
5	qPOD2A.4	AX-94872128	2AL	774,855,749	SQ, BLUP	3.18 ~ 3.33	6.07 ~ 7.38
6	qPOD2B.1	AX-108880049	2BL	712,656,410	YY, BLUP	3.08 ~ 3.70	7.10 ~ 8.48
7	qPOD2B.2	AX-110482619	2BL	790,626,375	SQ, BLUP	3.06 ~ 3.43	6.26 ~ 6.96
8	qPOD2D.1	AX-111838051	2DL	528,599,809	SQ, BLUP	3.28 ~ 4.08	7.49 ~ 9.23
9	qPOD2D.2	AX-108792169	2DL	571,937,591	KF, BLUP	3.89 ~ 4.22	9.12 ~ 9.73
10	qPOD2D.3	AX-111564790	2DL	613,093,026	YY, BLUP	3.05 ~ 4.59	5.62 ~ 12.67
11	qPOD2D.4	AX-94769224	2DL	648,288,487	SQ, BLUP	3.08 ~ 3.17	6.97 ~ 7.30
12	qPOD2D.5	AX-110105841	2DL	648,354,189	SQ, BLUP	3.12 ~ 3.63	6.70 ~ 7.96
13	qPOD3A.1	AX-109586344	3AS	11,834,418	KF, BLUP	3.28 ~ 4.23	7.52 ~ 10.12
14	qPOD3B.1	AX-95000091	3BS	59,463,829	YY, BLUP	3.12 ~ 3.45	7.11 ~ 7.92
15	qPOD3B.2	AX-111774576	3BS	60,381,223	SQ, KF	3.41 ~ 3.50	7.71 ~ 8.23
16	qPOD5A.1	AX-109025328	5AS	16,976,687	SQ, KF	3.58 ~ 3.65	8.10 ~ 8.55
17	qPOD6B.1	AX-109420494	6BS	227,564,600	SQ, KF	3.09 ~ 3.21	6.90 ~ 7.47
18	qPOD7A.1	AX-111699555	7AL	732,587,172	KF, BLUP	3.17 ~ 3.19	7.29 ~ 7.44
19	qPOD7A.2	AX-109890531	7AL	736,424,469	SQ, BLUP	3.11 ~ 3.51	7.10 ~ 7.92
20	qPOD7B.1	AX-89436260	7BL	742,059,238	KF, BLUP	3.72 ~ 3.77	7.01 ~ 7.04

^aNum Number
^bChr Chromosome
^cEnvironment: YY (Yuanyang), SQ (Shangqiu), KF (Kaifeng), BLUP (Best linear unbiased predictor)

ISSN: 1471-2229