Table 1 Statistics of clean reads in the transcriptomes annotated by 2017 version of tobacco genome and 2014 version of tobacco genome seperately
sample | 2017 clean_bases | 2014 clean_bases | 2017 Total mapped (%) | 2014 Total mapped (%) | 2017 Uniquely mapped (%) | 2014 Uniquely mapped (%) | 2017 Spliced reads (%) | 2014 Spliced reads (%) |
|---|---|---|---|---|---|---|---|---|
NY1 | 7.57G | 7.65G | 95.62 | 89.70 | 87.97 | 87.31 | 32.23 | 31.53 |
NY2 | 8.68G | 8.73G | 95.24 | 89.64 | 87.85 | 87.73 | 32.70 | 32.17 |
NY3 | 7.09G | 7.17G | 95.64 | 90.05 | 88.13 | 87.71 | 32.63 | 32.00 |
TY11 | 7.38G | 7.41G | 95.07 | 89.05 | 87.66 | 87.18 | 33.43 | 32.83 |
TY12 | 9.08G | 9.14G | 95.26 | 89.10 | 87.72 | 87.07 | 33.32 | 32.64 |
TY13 | 8.57G | 8.65G | 95.45 | 89.56 | 87.88 | 87.25 | 33.59 | 32.91 |
TY41 | 7.25G | 7.29G | 94.94 | 88.15 | 87.43 | 86.24 | 32.66 | 31.90 |
TY42 | 8.43G | 8.43G | 94.59 | 87.90 | 87.15 | 86.40 | 32.51 | 31.86 |
TY43 | 7.56G | 7.62G | 94.84 | 88.24 | 87.43 | 86.10 | 33.09 | 32.23 |
TY51 | 8.85G | 8.91G | 94.73 | 88.17 | 87.26 | 86.09 | 32.83 | 31.99 |
TY52 | 7.93G | 7.98G | 94.53 | 87.90 | 86.95 | 85.84 | 31.99 | 31.17 |
TY53 | 10.02G | 10.08G | 95.08 | 88.69 | 87.47 | 86.67 | 32.87 | 32.15 |